QM/MM study of the product-enzyme complex in P450cam catalysis

被引:31
|
作者
Lin, H
Schöneboom, JC
Cohen, S
Shaik, S
Thiel, W
机构
[1] Max Planck Inst Kohlenforsch, D-45470 Mulheim, Germany
[2] Hebrew Univ Jerusalem, Dept Organ Chem, IL-91904 Jerusalem, Israel
[3] Hebrew Univ Jerusalem, Lise Meitner Ctr Computat Quantum Chem, IL-91904 Jerusalem, Israel
来源
JOURNAL OF PHYSICAL CHEMISTRY B | 2004年 / 108卷 / 28期
关键词
D O I
10.1021/jp0493632
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The enzyme-product complex in P450(cam) (CYP101) has been studied by combined quantum mechanical/molecular mechanical (QM/MM) calculations. The central iron(III) porphyrin complex and part of the catalytic product (5-exo-hydroxycamphor) are treated with density functional theory, while the protein/solvent environment is represented by the CHARMM force field. The computations indicate a doublet minimum at an Fe-O distance of ca. 2.2 Angstrom, and a flat, barrierless potential for the dissociation of the Fe-O bond. Comparisons with analogous calculations on the isolated QM system in the gas phase show that inclusion of the protein/solvent environment lowers the activation energy for bond dissociation in the doublet state because of interactions within the binding pocket and accounts for a significant stabilization of the quartet and sextet states. The theoretical results allow for a tentative interpretation of recent ENDOR data.
引用
收藏
页码:10083 / 10088
页数:6
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