Achieving the Capacity of a DNA Storage Channel with Linear Coding Schemes

被引:1
|
作者
Levick, Kel [1 ]
Heckel, Reinhard [2 ]
Shomorony, Ilan [1 ]
机构
[1] Univ Illinois, Urbana, IL 61801 USA
[2] Tech Univ Munich, Munich, Germany
关键词
DNA storage; channel capacity; linear codes; DIGITAL INFORMATION; ROBUST;
D O I
10.1109/CISS53076.2022.9751151
中图分类号
TP [自动化技术、计算机技术];
学科分类号
0812 ;
摘要
Due to the redundant nature of DNA synthesis and sequencing technologies, a basic model for a DNA storage system is a multi-draw "shuffling-sampling" channel. In this model, a random number of noisy copies of each sequence is observed at the channel output. Recent works have characterized the capacity of such a DNA storage channel under different noise and sequencing models, relying on sophisticated typicality-based approaches for the achievability. Here, we consider a multi-draw DNA storage channel in the setting of noise corruption by a binary erasure channel. We show that, in this setting, the capacity is achieved by linear coding schemes. This leads to a considerably simpler derivation of the capacity expression of a multi-draw DNA storage channel than existing results in the literature.
引用
收藏
页码:218 / 223
页数:6
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