Selection of Aptamers for Mature White Adipocytes by Cell SELEX Using Flow Cytometry

被引:14
|
作者
Kim, Eun Young [1 ]
Kim, Ji Won [1 ,4 ]
Kim, Won Kon [1 ]
Han, Baek Soo [1 ]
Park, Sung Goo [2 ]
Chung, Bong Hyun [3 ]
Lee, Sang Chul [1 ,4 ]
Bae, Kwang-Hee [1 ,4 ]
机构
[1] KRIBB, Res Ctr Integrated Cellul, Taejon, South Korea
[2] KRIBB, Med Prote Res Ctr, Taejon, South Korea
[3] KRIBB, Bioconvergence Res Inst, BioNanotechnol Res Ctr, Taejon, South Korea
[4] Univ Sci & Technol UST Korea, Dept Funct Genom, Taejon, South Korea
来源
PLOS ONE | 2014年 / 9卷 / 05期
基金
新加坡国家研究基金会;
关键词
PROMOTES ADIPOGENIC DIFFERENTIATION; IN-VITRO; TYROSINE PHOSPHATASE; HIGH-AFFINITY; RNA LIGANDS; OBESITY; BROWN; ACETYLATION; GENERATION; ENRICHMENT;
D O I
10.1371/journal.pone.0097747
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Background: Adipose tissue, mainly composed of adipocytes, plays an important role in metabolism by regulating energy homeostasis. Obesity is primarily caused by an abundance of adipose tissue. Therefore, specific targeting of adipose tissue is critical during the treatment of obesity, and plays a major role in overcoming it. However, the knowledge of cell-surface markers specific to adipocytes is limited. Methods and Results: We applied the CELL SELEX (Systematic Evolution of Ligands by EXponential enrichment) method using flow cytometry to isolate molecular probes for specific recognition of adipocytes. The aptamer library, a mixture of FITC-tagged single-stranded random DNAs, is used as a source for acquiring molecular probes. With the increasing number of selection cycles, there was a steady increase in the fluorescence intensity toward mature adipocytes. Through 12 rounds of SELEX, enriched aptamers showing specific recognition toward mature 3T3-L1 adipocyte cells were isolated. Among these, two aptamers (MA-33 and 91) were able to selectively bind to mature adipocytes with an equilibrium dissociation constant (Kd) in the nanomolar range. These aptamers did not bind to preadipocytes or other cell lines (such as HeLa, HEK-293, or C2C12 cells). Additionally, it was confirmed that MA-33 and 91 can distinguish between mature primary white and primary brown adipocytes. Conclusions: These selected aptamers have the potential to be applied as markers for detecting mature white adipocytes and monitoring adipogenesis, and could emerge as an important tool in the treatment of obesity.
引用
收藏
页数:10
相关论文
共 50 条
  • [1] Selection of aptamers that bind to Chloramphenicol using SELEX
    Kim, Minjung
    Bae, Hyunjung
    Kim, Eunkyung
    Kim, Soyoun
    MOLECULAR & CELLULAR TOXICOLOGY, 2009, 5 (03) : 86 - 86
  • [2] DNA aptamers selection for Staphylococcus aureus cells by SELEX and Cell-SELEX
    Abreu de Melo, Mariane Izabella
    Cunha, Pricila da Silva
    Ferreira, Ieda Mendes
    Ribeiro de Andrade, Antero Silva
    MOLECULAR BIOLOGY REPORTS, 2023, 50 (01) : 157 - 165
  • [3] DNA aptamers selection for Staphylococcus aureus cells by SELEX and Cell-SELEX
    Mariane Izabella Abreu de Melo
    Pricila da Silva Cunha
    Iêda Mendes Ferreira
    Antero Silva Ribeiro de Andrade
    Molecular Biology Reports, 2023, 50 : 157 - 165
  • [4] Selection of Aptamers against live E.coli Cells using Cell SELEX
    Shipley, Sheena LaShae
    White, Ethan
    Kim, Sung-Kun
    FASEB JOURNAL, 2010, 24
  • [5] Selection of bovine catalase aptamers using non-SELEX
    Ashley, Jon
    Ji, Kaili
    Li, Sam F. Y.
    ELECTROPHORESIS, 2012, 33 (17) : 2783 - 2789
  • [6] Development of DNA aptamers using Cell-SELEX
    Sefah, Kwame
    Shangguan, Dihua
    Xiong, Xiangling
    O'Donoghue, Meghan B.
    Tan, Weihong
    NATURE PROTOCOLS, 2010, 5 (06) : 1169 - 1185
  • [7] Development of DNA aptamers using Cell-SELEX
    Kwame Sefah
    Dihua Shangguan
    Xiangling Xiong
    Meghan B O'Donoghue
    Weihong Tan
    Nature Protocols, 2010, 5 : 1169 - 1185
  • [8] In vitro selection of DNA, aptamers against renal cell carcinoma using living cell-SELEX
    Wang, Jine
    Zhang, Yajie
    Chen, Yang
    Hong, Shanni
    Sun, Yan
    Sun, Na
    Pei, Renjun
    TALANTA, 2017, 175 : 235 - 242
  • [9] Selection of DNA aptamers recognizing small cell lung cancer using living cell-SELEX
    Kunii, Takao
    Ogura, Shun-ichiro
    Mie, Masayasu
    Kobatake, Eiry
    ANALYST, 2011, 136 (07) : 1310 - 1312
  • [10] The efficient cell-SELEX strategy, Icell-SELEX, using isogenic cell lines for selection and counter-selection to generate RNA aptamers to cell surface proteins
    Takahashi, Masaki
    Sakota, Eri
    Nakamura, Yoshikazu
    BIOCHIMIE, 2016, 131 : 77 - 84