Mechanical properties of double-stranded DNA biolayers immobilized on microcantilever under axial compression

被引:23
|
作者
Zhang, Neng-Hui [1 ]
Chen, Jian-Zhong [1 ]
机构
[1] Shanghai Univ, Coll Sci, Shanghai Inst Appl Math & Mech, Dept Mech, Shanghai 200444, Peoples R China
基金
上海市自然科学基金;
关键词
Double-stranded DNA; Mechanical property; Axial compression; Young's modulus; Microcantilever; EQUATION-OF-STATE; LIQUID-CRYSTALS; HYDRATION FORCES; EJECTION FORCES; HYBRIDIZATION; BIOSENSORS; NANOMECHANICS; BACTERIOPHAGE; DEFLECTION; SURFACES;
D O I
10.1016/j.jbiomech.2009.03.050
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
In label-free biodetections based on microcantilever technology, double-stranded DNA (dsDNA) structures form through the linkage between probe single-stranded DNA (ssDNA) molecules immobilized on solid substrates and target ssDNA molecules in solutions. Mechanical/electrical properties of these biolayers are important factors for nanomechanical deflections of microcantilevers. In this paper, the biolayer immobilized on microcantilever is treated as a bar with a macroscopic elastic modulus on the basis of continuum mechanics viewpoints. In consideration of hydration force, screened electrostatic repulsion and conformational fluctuation in biolayers, load-deformation curves of dsDNA biolayers under axial compression are depicted with the help of the energy conservation law and a mesoscopic free energy presented by Strey et al. (1997,1999) [Strey, H.H., Parsegian, V.A., Podgornik, R., 1997. Equation of state for DNA liquid crystals: fluctuation enhanced electrostatic double layer repulsion. Physical Review Letters 78, 895-898: Strey, H.H., Parsegian, V.A.. Podgornik, R., 1999. Equation of state for polymer liquid crystals: theory and experiment. Physical Review E 59, 999-1008] from a liquid crystal theory. And the analytical relation between macroscopic Young's modulus of biolayers and nanoscopic geometrical properties of dsDNA, packing density, buffer salt solution concentration, etc. is also formulated. (C) 2009 Elsevier Ltd. All rights reserved.
引用
收藏
页码:1483 / 1487
页数:5
相关论文
共 50 条
  • [1] Numerical simulation on the mechanical characteristics of double-stranded DNA under axial stretching and lateral unzipping
    Yuan, C. A.
    Zhang, G. Q.
    Han, C. N.
    Chiang, K. N.
    Cui, Y.
    JOURNAL OF APPLIED PHYSICS, 2007, 101 (07)
  • [2] Mechanical properties of double-stranded DNA biofilm with Gaussian distribution
    Tang, Heng-Song
    Meng, Wei-Lie
    Zhang, Neng-Hui
    ACTA MECHANICA SINICA, 2014, 30 (01) : 15 - 19
  • [3] Mechanical properties of double-stranded DNA biofilm with Gaussian distribution
    Heng-Song Tang
    Wei-Lie Meng
    Neng-Hui Zhang
    Acta Mechanica Sinica, 2014, 30 (01) : 15 - 19
  • [4] Mechanical properties of double-stranded DNA biofilm with Gaussian distribution
    Heng-Song Tang
    Wei-Lie Meng
    Neng-Hui Zhang
    Acta Mechanica Sinica, 2014, 30 : 15 - 19
  • [5] Local Compression Properties of Double-Stranded DNA Based on a Dynamic Simulation
    Lei Xiao-Ling
    Qi Wen-Peng
    Fang Hai-Ping
    CHINESE PHYSICS LETTERS, 2013, 30 (12)
  • [6] Local Compression Properties of Double-Stranded DNA Based on a Dynamic Simulation
    雷晓玲
    亓文鹏
    方海平
    Chinese Physics Letters, 2013, 30 (12) : 190 - 194
  • [7] PROPERTIES OF DOUBLE-STRANDED DNA AS A POLYELECTROLYTE
    OHNISHI, T
    BIOPHYSICAL JOURNAL, 1963, 3 (06) : 459 - &
  • [8] A benchmark data set for the mechanical properties of double-stranded DNA and RNA under torsional constraint
    Vanderlinden, Willem
    Kolbeck, Pauline J.
    Kriegel, Franziska
    Walker, Philipp U.
    Lipfert, Jan
    DATA IN BRIEF, 2020, 30
  • [9] Systematic Comparison of Atomistic Force Fields for the Mechanical Properties of Double-Stranded DNA
    Roldan-Pinero, Carlos
    Luengo-Marquez, Juan
    Assenza, Salvatore
    Perez, Ruben
    JOURNAL OF CHEMICAL THEORY AND COMPUTATION, 2024, 20 (05) : 2261 - 2272
  • [10] Mechanical response of double-stranded DNA to dynamic excitation
    Mousavi, Hamze
    Mirzaei, Moein
    Jalilvand, Samira
    JOURNAL OF VIBRATION AND CONTROL, 2023, 29 (1-2) : 214 - 224