Pocket guide to solve inverse problems with GlobalBioIm

被引:36
|
作者
Soubies, Emmanuel [1 ]
Soulez, Ferreol [2 ]
McCann, Michael T. [1 ]
Thanh-an Pham [1 ]
Donati, Laurene [1 ]
Debarre, Thomas [1 ]
Sage, Daniel [1 ]
Unser, Michael [1 ]
机构
[1] Ecole Polytech Fed Lausanne, Biomed Imaging Grp, Lausanne, Switzerland
[2] Univ Lyon 1, Univ Lyon, CNRS, Ctr Rech Astrophys Lyon UMR5574, F-69230 St Genis Laval, France
基金
欧洲研究理事会;
关键词
inverse problems; image reconstruction; software; IMAGE-RECONSTRUCTION; ALGORITHM; RECOVERY; SOFTWARE; TOOLBOX;
D O I
10.1088/1361-6420/ab2ae9
中图分类号
O29 [应用数学];
学科分类号
070104 ;
摘要
GlobalBioIm is an open-source MATLAB (R) library for solving inverse problems. The library capitalizes on the strong commonalities between forward models to standardize the resolution of a wide range of imaging inverse problems. Endowed with an operator-algebra mechanism, GlobalBioIm allows one to easily solve inverse problems by combining elementary modules in a lego-like fashion. This user-friendly toolbox gives access to cutting-edge reconstruction algorithms, while its high modularity makes it easily extensible to new modalities and novel reconstruction methods. We expect GlobalBioIm to respond to the needs of imaging scientists looking for reliable and easy-to-use computational tools for solving their inverse problems. In this paper, we present in detail the structure and main features of the library. We also illustrate its flexibility with examples from multichannel deconvolution microscopy.
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页数:20
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