Analysis of Kunitz inhibitors from plants for comprehensive structural and functional insights

被引:56
|
作者
Bendre, Ameya D. [1 ,2 ]
Ramasamy, Sureshkumar [1 ]
Suresh, C. G. [1 ]
机构
[1] CSIR Natl Chem Lab, Div Biochem Sci, Pune 411008, Maharashtra, India
[2] Acad Sci & Innovat Res AcSIR, CSIR NCL Campus, Pune 411008, Maharashtra, India
关键词
beta-Trefoil fold; Inhibitory loop; Kunitz type inhibitor; Secondary structure; Serine protease; SERINE-PROTEASE INHIBITOR; CATION-PI INTERACTIONS; TRYPSIN-INHIBITOR; CRYSTAL-STRUCTURE; PROTEINASE-INHIBITORS; HELICOVERPA-ARMIGERA; ERYTHRINA-CAFFRA; 3-DIMENSIONAL STRUCTURE; CHYMOTRYPSIN INHIBITOR; LEUCAENA-LEUCOCEPHALA;
D O I
10.1016/j.ijbiomac.2018.02.148
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Legume Kunitz type trypsin inhibitor (KTI) family is one of the most versatile families of proteins. A typical KTI features a single peptide folded in beta-trefoil manner, with the molecular weight about 20-22 kDa and two disulphide bonds. The members are known to inhibit a wide range of serpins proteases at the same time many of them possess unique features. Copaifera langsdoiffii Trypsin inhibitor (CTI) has a beta-trefoil fold made up of two non-covalently bound polypeptide chains with only a single disulfide bridge. Delonix regia Trypsin inhibitor (DrTI) has one amino acid insertion between P1 and P2 of the reactive site distorting its conformation. Bauhinia bauhinioides Cruzipain inhibitor (BbCI) has a conservative beta-trefoil fold but lacks disulfide bonds. Such subtle differences in structures make Kunitz inhibitors different from other inhibitor families. Most of the studies on these inhibitors are focused towards their proposed role in defense from insect pests and wounding but their exact physiological role in nature is still uncharted. Thus, it would be very interesting to closely analyze the structural details of these inhibitors in order to ascertain their biological role and other fascinating applications. (C) 2018 Elsevier B.V. All rights reserved.
引用
收藏
页码:933 / 943
页数:11
相关论文
共 50 条
  • [1] Plant Kunitz Protease Inhibitors: Structural and Functional Diversity
    Srp, Jaroslav
    Mares, Michael
    CHEMICKE LISTY, 2016, 110 (11): : 761 - 768
  • [2] Structural and Functional Properties of Kunitz Proteinase Inhibitors from Leguminosae: A Mini Review
    Vilela Oliva, Maria Luiza
    Ferreira, Rodrigo da Silva
    Ferreira, Joana Gasperazzo
    Andrade de Paula, Claudia Alessandra
    Salas, Carlos E.
    Sampaio, Misako Uemura
    CURRENT PROTEIN & PEPTIDE SCIENCE, 2011, 12 (05) : 348 - 357
  • [3] A new scaffold for inhibition of cysteine proteases: Structural and functional characterization of Kunitz inhibitors from potato
    Mishra, Manasi
    Brynda, Jiri
    Mares, Michael
    PROTEIN SCIENCE, 2015, 24 : 13 - 13
  • [4] Evolutionary Aspects of the Structural Convergence and Functional Diversification of Kunitz-Domain Inhibitors
    Manasi Mishra
    Journal of Molecular Evolution, 2020, 88 : 537 - 548
  • [6] Comprehensive structural and functional analysis of hVEGFR1: Insights into phosphorylation, molecular interactions, and potential inhibitors through docking and dynamics simulations
    Munikumar, Manne
    Pradeepkiran, Jangampalli Adi
    Kumar, Marineni Kiran
    Banapuram, Swathi
    Edurkala, Akshatha Bhat
    CANCER TREATMENT AND RESEARCH COMMUNICATIONS, 2024, 39
  • [7] Comprehensive analysis of polygalacturonase genes offers new insights into their origin and functional evolution in land plants
    Mahmood, Umer
    Fan, Yonghai
    Wei, Siyu
    Niu, Yue
    Li, Yanhua
    Huang, Hualei
    Chen, Yuling
    Tang, Zhanglin
    Liu, Liezhao
    Qu, Cunmin
    Zhang, Kai
    Li, Jiana
    Lu, Kun
    GENOMICS, 2021, 113 (01) : 1096 - 1108
  • [8] Intrinsic Disorder in Protein Interactions: Insights From a Comprehensive Structural Analysis
    Fong, Jessica H.
    Shoemaker, Benjamin A.
    Garbuzynskiy, Sergiy O.
    Lobanov, Michail Y.
    Galzitskaya, Oxana V.
    Panchenko, Anna R.
    PLOS COMPUTATIONAL BIOLOGY, 2009, 5 (03)
  • [9] Comprehensive analysis of structural and elastic properties of SnTe: insights from LDA, GGA and PBEsol calculations with density functional theory
    Devi, Seram Rebika
    Sharma, B. Indrajit
    JOURNAL OF THE KOREAN PHYSICAL SOCIETY, 2025, : 656 - 664
  • [10] Functional insights from structural predictions:: Analysis of the Escherichia coli genome
    Rychlewski, L
    Zhang, BH
    Godzik, A
    PROTEIN SCIENCE, 1999, 8 (03) : 614 - 624