Diffusion MRI Signal Augmentation: From Single Shell to Multi Shell with Deep Learning

被引:23
|
作者
Koppers, Simon [1 ]
Haarburger, Christoph [1 ]
Merhof, Dorit [1 ]
机构
[1] Rhein Westfal TH Aachen, Inst Imaging & Comp Vis, Aachen, Germany
来源
COMPUTATIONAL DIFFUSION MRI | 2017年
关键词
TISSUE;
D O I
10.1007/978-3-319-54130-3_5
中图分类号
R445 [影像诊断学];
学科分类号
100207 ;
摘要
High Angular Resolution Diffusion Imaging makes it possible to capture information about the course and location of complex fiber structures in the human brain. Ideally, multi-shell sampling would be applied, which however increases the acquisition time. Therefore, multi-shell acquisitions are considered infeasible for practical use in a clinical setting. In this work, we present a data-driven approach that is able to augment single-shell signals to multi-shell signals based on Deep Neural Networks and Spherical Harmonics. The proposed concept is evaluated on synthetic data to investigate the impact of noise and number of gradients. Moreover, it is evaluated on human brain data from the Human Connectome Project, comprising 100 scans from different subjects. The proposed approach makes it possible to drastically reduce the signal acquisition time and performs equally well on both synthetic as well as real human brain data.
引用
收藏
页码:61 / 70
页数:10
相关论文
共 50 条
  • [1] Multi-shell dMRI Estimation from Single-Shell Data via Deep Learning
    Dugan, Reagan
    Carmichael, Owen
    MACHINE LEARNING IN CLINICAL NEUROIMAGING, MLCN 2023, 2023, 14312 : 14 - 22
  • [2] Contrastive semi-supervised harmonization of single-shell to multi-shell diffusion MRI
    Hansen, Colin B.
    Schilling, Kurt G.
    Rheault, Francois
    Resnick, Susan
    Shafer, Andrea T.
    Beason-Held, Lori L.
    Landman, Bennett A.
    MAGNETIC RESONANCE IMAGING, 2022, 93 : 73 - 86
  • [3] Deep learning-based free-water correction for single-shell diffusion MRI
    Yao, Tianyuan
    Archer, Derek B.
    Kanakaraj, Praitayini
    Newlin, Nancy
    Bao, Shunxing
    Moyer, Daniel
    Schilling, Kurt
    Landman, Bennett A.
    Huo, Yuankai
    MAGNETIC RESONANCE IMAGING, 2025, 117
  • [4] Combining Multi-Shell Diffusion with Conventional MRI Improves Molecular Diagnosis of Diffuse Gliomas with Deep Learning
    Karami, Golestan
    Pascuzzo, Riccardo
    Figini, Matteo
    Del Gratta, Cosimo
    Zhang, Hui
    Bizzi, Alberto
    CANCERS, 2023, 15 (02)
  • [5] Multi-shell diffusion signal recovery from sparse measurements
    Rathi, Y.
    Michailovich, O.
    Laun, F.
    Setsompop, K.
    Grant, P. E.
    Westin, C. -F.
    MEDICAL IMAGE ANALYSIS, 2014, 18 (07) : 1143 - 1156
  • [6] Estimation of Extracellular Volume from Regularized Multi-shell Diffusion MRI
    Pasternak, Ofer
    Shenton, Martha E.
    Westin, Carl-Fredrik
    MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION - MICCAI 2012, PT II, 2012, 7511 : 305 - 312
  • [7] Apparent propagator anisotropy from single-shell diffusion MRI acquisitions
    Aja-Fernandez, Santiago
    Tristan-Vega, Antonio
    Jones, Derek K.
    MAGNETIC RESONANCE IN MEDICINE, 2021, 85 (05) : 2869 - 2881
  • [8] Deep Learning Estimation of Multi-Tissue Constrained Spherical Deconvolution with Limited Single Shell DW-MRI
    Nath, Vishwesh
    Pathak, Sudhir K.
    Schilling, Kurt G.
    Schneider, Walt
    Landman, Bennett A.
    MEDICAL IMAGING 2020: IMAGE PROCESSING, 2021, 11313
  • [9] Viability of AMURA biomarkers from single-shell diffusion MRI in clinical studies
    Martin-Martin, Carmen
    Planchuelo-Gomez, Alvaro
    Guerrero, Angel L.
    Garcia-Azorin, David
    Tristan-Vega, Antonio
    de Luis-Garcia, Rodrigo
    Aja-Fernandez, Santiago
    FRONTIERS IN NEUROSCIENCE, 2023, 17
  • [10] Improved fidelity of brain microstructure mapping from single-shell diffusion MRI
    Taquet, Maxime
    Scherrer, Benoit
    Boumal, Nicolas
    Peters, Jurriaan M.
    Macq, Benoit
    Warfield, Simon K.
    MEDICAL IMAGE ANALYSIS, 2015, 26 (01) : 268 - 286