Diverse and Novel nifH and nifH-Like Gene Sequences in the Deep-Sea Methane Seep Sediments of the Okhotsk Sea

被引:52
|
作者
Dang, Hongyue [1 ]
Luan, Xiwu [2 ]
Zhao, Jingyi [1 ]
Li, Jing [1 ]
机构
[1] China Univ Petr E China, Ctr Bioengn & Biotechnol, Qingdao 266555, Peoples R China
[2] Chinese Acad Sci, Inst Oceanol, Key Lab Marine Geol & Environm, Qingdao 266071, Peoples R China
关键词
NITROGEN-FIXATION; MICROBIAL COMMUNITIES; MARINE WATERS; PACIFIC-OCEAN; REDUCTION; ARCHAEA; IDENTIFICATION; ENVIRONMENTS; OXIDATION; BACTERIA;
D O I
10.1128/AEM.02556-08
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Diverse nifH and nifH-like gene sequences were obtained from the deep-sea surface sediments of the methane hydrate-bearing Okhotsk Sea. Some sequences formed novel families of the NifH or NifH-like proteins, of currently unresolved bacterial or archaeal origin. Comparison with other marine environments indicates environmental specificity of some of the sequences, either unique to the methane seep sediments of the Okhotsk Sea or to the general deep-sea methane seep sedimentary environments.
引用
下载
收藏
页码:2238 / 2245
页数:8
相关论文
共 50 条
  • [1] Deep-sea methane seep sediments in the Okhotsk Sea sustain diverse and abundant anammox bacteria
    Shao, Sudong
    Luan, Xiwu
    Dang, Hongyue
    Zhou, Haixia
    Zhao, Yakun
    Liu, Haitao
    Zhang, Yunbo
    Dai, Lingqing
    Ye, Ying
    Klotz, Martin G.
    FEMS MICROBIOLOGY ECOLOGY, 2014, 87 (02) : 503 - 516
  • [2] Diversity of nifH gene sequences in the sediments of South China Sea
    Wu, Lixian
    Cui, Yanhua
    Chen, Sanfeng
    AFRICAN JOURNAL OF MICROBIOLOGY RESEARCH, 2011, 5 (32): : 5972 - 5977
  • [3] Diversity, abundance and distribution of amoA-encoding archaea in deep-sea methane seep sediments of the Okhotsk Sea
    Dang, Hongyue
    Luan, Xi-Wu
    Chen, Ruipeng
    Zhang, Xiaoxia
    Guo, Lizhong
    Klotz, Martin G.
    FEMS MICROBIOLOGY ECOLOGY, 2010, 72 (03) : 370 - 385
  • [4] Phylogenetically and catabolically diverse diazotrophs reside in deep-sea cold seep sediments
    Dong, Xiyang
    Zhang, Chuwen
    Peng, Yongyi
    Zhang, Hong-Xi
    Shi, Ling-Dong
    Wei, Guangshan
    Hubert, Casey R. J.
    Wang, Yong
    Greening, Chris
    NATURE COMMUNICATIONS, 2022, 13 (01)
  • [5] Phylogenetically and catabolically diverse diazotrophs reside in deep-sea cold seep sediments
    Xiyang Dong
    Chuwen Zhang
    Yongyi Peng
    Hong-Xi Zhang
    Ling-Dong Shi
    Guangshan Wei
    Casey R. J. Hubert
    Yong Wang
    Chris Greening
    Nature Communications, 13
  • [6] Microbial Diversity in Deep-sea Methane Seep Sediments Presented by SSU rRNA Gene Tag Sequencing
    Nunoura, Takuro
    Takaki, Yoshihiro
    Kazama, Hiromi
    Hirai, Miho
    Ashi, Juichiro
    Imachi, Hiroyuki
    Takai, Ken
    MICROBES AND ENVIRONMENTS, 2012, 27 (04) : 382 - 390
  • [7] KINETIC MODELING OF METHANE IN RECENT DEEP-SEA SEDIMENTS
    BERNARD, BB
    TRANSACTIONS-AMERICAN GEOPHYSICAL UNION, 1977, 58 (12): : 1154 - 1154
  • [8] Marine paleogene sediments from the northern slope of the Kuril Deep-Sea Basin, Sea of Okhotsk
    Bezverkhnii, VL
    Gorovaya, MT
    Markevich, VS
    Nabiullin, AA
    STRATIGRAPHY AND GEOLOGICAL CORRELATION, 2003, 11 (06) : 594 - 605
  • [9] Microbial ecology of sulfur cycling near the sulfate-methane transition of deep-sea cold seep sediments
    Li, Wen-Li
    Dong, Xiyang
    Lu, Rui
    Zhou, Ying-Li
    Zheng, Peng-Fei
    Feng, Dong
    Wang, Yong
    ENVIRONMENTAL MICROBIOLOGY, 2021, 23 (11) : 6844 - 6858
  • [10] Diverse bacteria associated with root nodules of spontaneous legumes in Tunisia and first report for nifH-like gene within the genera Microbacterium and Starkeya
    Zakhia, Frederic
    Jeder, Habib
    Willems, Anne
    Gillis, Monique
    Dreyfus, Bernard
    de Lajudie, Philippe
    MICROBIAL ECOLOGY, 2006, 51 (03) : 375 - 393