Integrative analysis of the characteristics of lipid metabolism-related genes as prognostic prediction markers for hepatocellular carcinoma

被引:13
|
作者
Zhu, P. [1 ]
Li, F-F [2 ]
Zeng, J. [5 ]
Tang, D-G [3 ,4 ]
Chen, W-B [3 ,4 ]
Guo, C-C [1 ]
机构
[1] Shenzhen Pingshan Peoples Hosp, Cent Lab, Shenzhen, Peoples R China
[2] Jinan Univ, Affiliated Hosp 1, 1 Class Ward 2, Guangzhou, Peoples R China
[3] Jinan Univ, Dept Clin Med Res Ctr, Clin Med Coll 2, Guangzhou, Peoples R China
[4] Southern Univ Sci & Technol, Shenzhen Peoples Hosp, Affiliated Hosp 1, Shenzhen, Peoples R China
[5] Univ Chinese Acad Sci, Shenzhen Hosp, Ctr Med Genet & Mol Diag, Shenzhen, Peoples R China
关键词
Lipid metabolism; Gene; Prognosis; Hepatocellular carcinoma; Bioinformatics analysis; ENERGY-METABOLISM; MICROENVIRONMENT; IMMUNOMETABOLISM;
D O I
10.26355/eurrev_202101_24355
中图分类号
R9 [药学];
学科分类号
1007 ;
摘要
OBJECTIVE: Dysregulated lipid metabolism has been reported in the progression of hepatocellular carcinoma (HCC). In the present study. we investigated the molecular characteristics of lipid-metabolism-related genes (IMRGs) as prognostic markers for HCC. MATERIALS AND METHODS: Multi-dimensional bioinformatics analyses were performed to comprehensively analyze IMRGs, and to construct prognostic prediction signatures. RESULTS: Data of 770 HCC patients and their corresponding 776 IMRGs were downloaded from three databases. Patients were classified into 2 molecular clusters that were associated with overall survival, clinical characteristics, and immune cells. The biological functions of the IMRGs differentially expressed between the 2 clusters were associated with tumor-related metabolic pathways. A 6 IMRG signature (6-IS), consisting of FMO3, SLC11A1, RNF10, KCNH2, ME1, and ZIC2, was established as an independent prognostic factor for HCC. The performance of the signature of 6-IS prognostic was verified in a validation set and compared to an external data set. It was revealed that the 6-IS could effectively predict the prognosis of patients with HCC. CONCLUSIONS: This study provides new insights into the role of IMRGs in the pathogenesis of HCC, and presents a novel signature (6-IS) to predict the prognosis of HCC.
引用
收藏
页码:116 / 126
页数:11
相关论文
共 50 条
  • [2] RETRACTED: Integrative analysis of the characteristic of lipid metabolism-related genes for the prognostic prediction of hepatocellular carcinoma (Retracted article. See vol. 102, 2023)
    Zhu, P.
    Zhang, F.
    Deng, W.
    Chen, W-B
    MEDICINE, 2022, 101 (39) : E30695
  • [3] Comprehensive Analysis of the Expression and Prognosis for Lipid Metabolism-Related Genes in Hepatocellular Carcinoma
    Fan, Wen-Jie
    Ding, Hao
    Chen, Xiang-Xun
    Yang, Lin
    SOUTH ASIAN JOURNAL OF CANCER, 2023, 12 (02) : 126 - 134
  • [4] Identification of a prognostic signature of nine metabolism-related genes for hepatocellular carcinoma
    Tang, Chaozhi
    Ma, Jiakang
    Liu, Xiuli
    Liu, Zhengchun
    PEERJ, 2020, 8
  • [5] Integrative analysis of metabolism subtypes and identification of prognostic metabolism-related genes for glioblastoma
    Li, Jiahui
    Wei, Yutian
    Liu, Jiali
    Cheng, Shupeng
    Zhang, Xia
    Qiu, Huaide
    Li, Jianan
    He, Chuan
    BIOSCIENCE REPORTS, 2024, 44 (03)
  • [6] A novel prognostic model for hepatocellular carcinoma based on pyruvate metabolism-related genes
    Qingmiao Shi
    Chen Xue
    Yifan Zeng
    Xinyu Gu
    Jinzhi Wang
    Lanjuan Li
    Scientific Reports, 13 (1)
  • [7] Prognostic significance of pyrimidine metabolism-related genes as risk biomarkers in hepatocellular carcinoma
    Lu, Jie
    Shi, Lili
    Zhang, Caiming
    Zhang, Fabiao
    Cai, Miaoguo
    JOURNAL OF CHEMOTHERAPY, 2024,
  • [8] A novel prognostic model for hepatocellular carcinoma based on pyruvate metabolism-related genes
    Shi, Qingmiao
    Xue, Chen
    Zeng, Yifan
    Gu, Xinyu
    Wang, Jinzhi
    Li, Lanjuan
    SCIENTIFIC REPORTS, 2023, 13 (01):
  • [9] Prognostic value of fatty acid metabolism-related genes in patients with hepatocellular carcinoma
    He, Dongsheng
    Cai, Lifang
    Huang, Weiming
    Weng, Qingqing
    Lin, Xi
    You, Mengxing
    Liao, Shengyin
    AGING-US, 2021, 13 (13): : 17847 - 17863
  • [10] Prognostic Biomarkers for Hepatocellular Carcinoma Based on Serine and Glycine Metabolism-related Genes
    Cai, Xufan
    Xu, Fang
    Wang, Zhaohong
    Chen, Hui
    Lin, Shengzhang
    JOURNAL OF CLINICAL AND TRANSLATIONAL HEPATOLOGY, 2024, 12 (03) : 266 - 277