Structure and dynamics of high-spin Ru2+ in aqueous solution:: Ab initio QM/MM molecular dynamics simulation

The structural and dynamical properties of high-spin RU in aqueous solution have been theoretically studied using molecular dynamics (MD) simulations. The conventional MID simulation based on pair potentials gives the overestimated average first shell coordination number of 9, whereas the value of 5.9 was observed when the three-body corrected function was included. A combined ab initio quantum mechanical/molecular mechanical (QM/MM) molecular dynamics simulation has been performed to take into account the many-body effects on the hydration shell structure of Ru2+. The most important region, the first hydration shell, was treated by ab initio quantum mechanics at UHF level using the SBKJC VDZ ECP basis set for Ru2+ and the 6-31G* basis sets for water. An exact coordination number of 6 for the first hydration shell was obtained from the QM/MM simulation. The QM/MM simulation predicts the average Ru2+-O distance of 2.42 angstrom for the first hydration shell, whereas the values of 2.34 and 2.46 angstrom are resulted from the pair potentials without and with the three-body corrected simulations, respectively. Several other structural properties representing position and orientation of the solvate molecules were evaluated for describing the hydration shell structure of the Ru2+ ion in dilute aqueous solution. A mean residence time of 7.1 ps was obtained for water ligands residing in the second hydration shell. (c) 2006 Elsevier B.V. All rights reserved.