The p53-signaling pathway and colorectal cancer: Interactions between downstream p53 target genes and miRNAs

被引:54
|
作者
Slattery, Martha L. [1 ]
Mullany, Lila E. [1 ]
Wolff, Roger K. [1 ]
Sakoda, Lori C. [2 ]
Samowitz, Wade S. [3 ]
Herrick, Jennifer S. [1 ]
机构
[1] Univ Utah, Dept Med, 383 Colorow, Salt Lake City, UT 84112 USA
[2] Kaiser Permanente Northern Calif, Div Res, Oakland, CA USA
[3] Univ Utah, Dept Pathol, Salt Lake City, UT USA
关键词
Colorectal Cancer; TP53; miRNA; mRNA; ENERGY-BALANCE; COLON-CANCER; EXPRESSION; MICRORNAS; APOPTOSIS; CELL; PROFILES; MIR-34A; SITE; LOOP;
D O I
10.1016/j.ygeno.2018.05.006
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Introduction: We examined expression of genes in the p53-signaling pathway. We determine if genes that have significantly different expression in carcinoma tissue compared to normal mucosa also have significantly differentially expressed miRNAs. We utilize a sample of 217 CRC cases. Methods: We focused on fold change (FC) > 1.50 or < 0.67 for genes and miRNAs, that were statistically significant after adjustment for multiple comparisons. We evaluated the linear association between the differential expression of miRNA and mRNA. miRNA:mRNA seed-region matches also were determined. Results: Eleven dysregulated genes were associated with 37 dysregulated miRNAs; all were down-stream from the TP53 gene. MiR-150-5p (HR = 0.82) and miR-196b-5p (HR 0.73) significantly reduced the likelihood of dying from CRC when miRNA expression increased in rectal tumors. Conclusions: Our data suggest that activation of p53 from cellular stress, could target downstream genes that in turn could influence cell cycle arrest, apoptosis, and angiogenesis through mRNA:miRNA interactions.
引用
收藏
页码:762 / 771
页数:10
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