Maximum likelihood estimation of the frequency of null alleles at microsatellite loci

被引:262
|
作者
Kalinowski, Steven T. [1 ]
Taper, Mark L. [1 ]
机构
[1] Montana State Univ, Dept Ecol, Bozeman, MT 59717 USA
基金
美国国家科学基金会;
关键词
allele; estimation; frequency; microsatellite; null;
D O I
10.1007/s10592-006-9134-9
中图分类号
X176 [生物多样性保护];
学科分类号
090705 ;
摘要
We review three methods for estimating the frequency of null alleles at codominant loci (such as microsatellite loci) and present a new maximum likelihood approach. Computer simulations show that the maximum likelihood estimator has a smaller root mean squared error than previous estimators.
引用
收藏
页码:991 / 995
页数:5
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