Variational Approach to Enhanced Sampling and Free Energy Calculations

被引:213
|
作者
Valsson, Omar [1 ]
Parrinello, Michele
机构
[1] Univ Svizzera Italiana, ETH Zurich, Dept Chem & Appl Biosci, CH-6900 Lugano, Switzerland
关键词
MOLECULAR-DYNAMICS; METADYNAMICS; EFFICIENT;
D O I
10.1103/PhysRevLett.113.090601
中图分类号
O4 [物理学];
学科分类号
0702 ;
摘要
The ability of widely used sampling methods, such as molecular dynamics or Monte Carlo simulations, to explore complex free energy landscapes is severely hampered by the presence of kinetic bottlenecks. A large number of solutions have been proposed to alleviate this problem. Many are based on the introduction of a bias potential which is a function of a small number of collective variables. However constructing such a bias is not simple. Here we introduce a functional of the bias potential and an associated variational principle. The bias that minimizes the functional relates in a simple way to the free energy surface. This variational principle can be turned into a practical, efficient, and flexible sampling method. A number of numerical examples are presented which include the determination of a three-dimensional free energy surface. We argue that, beside being numerically advantageous, our variational approach provides a convenient and novel standpoint for looking at the sampling problem.
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页数:5
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