Decision rules for efficient classification of biological data

被引:5
|
作者
Guarracino, Mario R. [2 ]
Chinchuluun, Altannar [1 ]
Pardalos, Panos M. [1 ]
机构
[1] Univ Florida, Ctr Appl Optimizat, Gainesville, FL 32611 USA
[2] CNR, High Performance Comp & Networking Inst, Naples, Italy
关键词
Classification; Feature selection; Decision rules; Generalized eigenvalue classification; GENE-EXPRESSION DATA; CANCER; PREDICTION;
D O I
10.1007/s11590-009-0115-z
中图分类号
C93 [管理学]; O22 [运筹学];
学科分类号
070105 ; 12 ; 1201 ; 1202 ; 120202 ;
摘要
Cancer classification using genomic data is one of the major research areas in the medical field. Therefore, a number of binary classification methods have been proposed in recent years. Top Scoring Pair (TSP) method is one of the most promising techniques that classify genomic data in a lower dimensional subspace using a simple decision rule. In the present paper, we propose a supervised classification technique that utilizes incremental generalized eigenvalue and top scoring pair classifiers to obtain higher classification accuracy with a small training set. We validate our method by applying it to well known microarray data sets.
引用
收藏
页码:357 / 366
页数:10
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