Information-Geometric Optimization with Natural Selection

被引:3
|
作者
Otwinowski, Jakub [1 ]
LaMont, Colin H. [1 ]
Nourmohammad, Armita [1 ,2 ,3 ]
机构
[1] Max Planck Inst Dynam & Selforg, D-37077 Gottingen, Germany
[2] Univ Washington, Dept Phys, Seattle, WA 98195 USA
[3] Fred Hutchinson Canc Res Ctr, Seattle, WA 98109 USA
关键词
optimization; population genetics; quantitative genetics; EVOLUTION;
D O I
10.3390/e22090967
中图分类号
O4 [物理学];
学科分类号
0702 ;
摘要
Evolutionary algorithms, inspired by natural evolution, aim to optimize difficult objective functions without computing derivatives. Here we detail the relationship between classical population genetics of quantitative traits and evolutionary optimization, and formulate a new evolutionary algorithm. Optimization of a continuous objective function is analogous to searching for high fitness phenotypes on a fitness landscape. We describe how natural selection moves a population along the non-Euclidean gradient that is induced by the population on the fitness landscape (the natural gradient). We show how selection is related to Newton's method in optimization under quadratic fitness landscapes, and how selection increases fitness at the cost of reducing diversity. We describe the generation of new phenotypes and introduce an operator that recombines the whole population to generate variants. Finally, we introduce a proof-of-principle algorithm that combines natural selection, our recombination operator, and an adaptive method to increase selection and find the optimum. The algorithm is extremely simple in implementation; it has no matrix inversion or factorization, does not require storing a covariance matrix, and may form the basis of more general model-based optimization algorithms with natural gradient updates.
引用
收藏
页数:16
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