Multiomics Analysis Reveals that GLS and GLS2 Differentially Modulate the Clinical Outcomes of Cancer

被引:60
|
作者
Saha, Subbroto Kumar [1 ]
Islam, S. M. Riazul [2 ]
Abdullah-AL-Wadud, M. [3 ]
Islam, Saiful [4 ]
Ali, Farman [5 ]
Park, Kyoung Sik [6 ]
机构
[1] Konkuk Univ, Dept Stem Cell & Regenerat Biotechnol, 120 Neungdong Ro, Seoul 05029, South Korea
[2] Sejong Univ, Dept Comp Sci & Engn, 209 Neungdong Ro, Seoul 05006, South Korea
[3] King Saud Univ, Dept Software Engn, Riyadh 11543, Saudi Arabia
[4] King Saud Univ, Dept Comp Sci, Riyadh 11543, Saudi Arabia
[5] Inha Univ, Dept Informat & Commun Engn, Incheon 22212, South Korea
[6] Konkuk Univ, Dept Surg, Med Ctr, 120 Neungdong Ro, Seoul 05029, South Korea
关键词
glutaminase; GLS; GLS2; multiomics; prognostic biomarkers; clinical outcomes; cancer therapy; PROMOTES-GLUTAMINE-METABOLISM; GENE-EXPRESSION SIGNATURE; BREAST-CANCER; LUNG-CANCER; POOR-PROGNOSIS; KRAS; ADENOCARCINOMA; CARCINOMA; DNA; CLASSIFICATION;
D O I
10.3390/jcm8030355
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Kidney-type glutaminase (GLS) and liver-type glutaminase (GLS2) are dysregulated in many cancers, making them appealing targets for cancer therapy. However, their use as prognostic biomarkers is controversial and remains an active area of cancer research. Here, we performed a systematic multiomic analysis to determine whether glutaminases function as prognostic biomarkers in human cancers. Glutaminase expression and methylation status were assessed and their prominent functional protein partners and correlated genes were identified using various web-based bioinformatics tools. The cross-cancer relationship of glutaminases with mutations and copy number alterations was also investigated. Gene ontology (GO) and pathway analysis were performed to assess the integrated effect of glutaminases and their correlated genes on various cancers. Subsequently, the prognostic roles of GLS and GLS2 in human cancers were mined using univariate and multivariate survival analyses. GLS was frequently over-expressed in breast, esophagus, head-and-neck, and blood cancers, and was associated with a poor prognosis, whereas GLS2 overexpression implied poor overall survival in colon, blood, ovarian, and thymoma cancers. Both GLS and GLS2 play oncogenic and anti-oncogenic roles depending on the type of cancer. The varying prognostic characteristics of glutaminases suggest that GLS and GLS2 expression differentially modulate the clinical outcomes of cancers.
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页数:28
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