Identifying copy number alterations from targeted sequencing data

被引：0
|
作者：
Fendler, Bernard [1 ]
Abo, Ryan [2 ]
Hunter, Samuel [2 ]
Ducar, Matthew [2 ]
Garcia, Elizabeth [1 ]
Van Hummelen, Paul [2 ]
Lindeman, Neal [1 ]
MacConaill, Laura [3 ]
机构：
[1] Brigham & Womens Hosp, Boston, MA 02115 USA
[2] Dana Farber Canc Inst, Boston, MA 02115 USA
[3] Brigham & Womens Hosp, Dana Farber Canc Inst, Boston, MA 02115 USA
来源：
CANCER RESEARCH | 2015年 / 75卷
关键词：
D O I：
10.1158/1538-7445.AM2015-4850
中图分类号：
R73 [肿瘤学];
学科分类号：
100214 ;
摘要：
4850
引用
收藏
页数：2
相关论文
共 50 条
  • [1] Comparative analysis of methods for identifying somatic copy number alterations from deep sequencing data
    Alkodsi, Amjad
    Louhimo, Riku
    Hautaniemi, Sampsa
    BRIEFINGS IN BIOINFORMATICS, 2015, 16 (02) : 242 - 254
  • [2] Estimation of Copy Number Alterations from Exome Sequencing Data
    Valdes-Mas, Rafael
    Bea, Silvia
    Puente, Diana A.
    Lopez-Otin, Carlos
    Puente, Xose S.
    PLOS ONE, 2012, 7 (12):
  • [3] Detection of Copy Number Variations from Targeted Sequencing Data
    Gandin, Ilaria
    Vuckovic, Dragana
    HUMAN HEREDITY, 2013, 76 (02) : 106 - 106
  • [4] Assessing Copy Number Alterations in Targeted, Amplicon-Based Next-Generation Sequencing Data
    Grasso, Catherine
    Butler, Timothy
    Rhodes, Katherine
    Quist, Michael
    Neff, Tanaya L.
    Moore, Stephen
    Tomlins, Scott A.
    Reinig, Erica
    Beadling, Carol
    Andersen, Mark
    Corless, Christopher L.
    JOURNAL OF MOLECULAR DIAGNOSTICS, 2015, 17 (01): : 53 - 63
  • [5] Copy number variant detection tool for targeted sequencing data
    Vold, T.
    Singh, A. K.
    Lavik, L. A. S.
    Olsen, M. F.
    EUROPEAN JOURNAL OF HUMAN GENETICS, 2019, 27 : 1643 - 1644
  • [6] Detection of Recurrent Copy Number Alterations in Targeted Acute Myeloid Leukemia Sequencing Panels
    Abel, H. J.
    Miller, C.
    Ley, T.
    Duncavage, E. J.
    JOURNAL OF MOLECULAR DIAGNOSTICS, 2014, 16 (06): : 722 - 722
  • [7] Detection of Somatic Copy Number Alterations in Cancer Using Targeted Exome Capture Sequencing
    Lonigro, Robert J.
    Grasso, Catherine S.
    Robinson, Dan R.
    Jing, Xiaojun
    Wu, Yi-Mi
    Cao, Xuhong
    Quist, Michael J.
    Tomlins, Scott A.
    Pienta, Kenneth J.
    Chinnaiyan, Arul M.
    NEOPLASIA, 2011, 13 (11): : 1019 - U45
  • [8] Cancer phylogenetic inference using copy number alterations detected from DNA sequencing data
    Lu, Bingxin
    CANCER PATHOGENESIS AND THERAPY, 2025, 3 (01): : 16 - 29
  • [9] isoCNV: in silico optimization of copy number variant detection from targeted or exome sequencing data
    Barcelona-Cabeza, Rosa
    Sanseverino, Walter
    Aiese Cigliano, Riccardo
    BMC BIOINFORMATICS, 2021, 22 (01)
  • [10] isoCNV: in silico optimization of copy number variant detection from targeted or exome sequencing data
    Rosa Barcelona-Cabeza
    Walter Sanseverino
    Riccardo Aiese Cigliano
    BMC Bioinformatics, 22
12345