Mass spectrometry-based tear proteomics for noninvasive biomarker discovery

被引:0
|
作者
Ponzini, Erika [1 ]
Santambrogio, Carlo [2 ]
De Palma, Antonella [3 ]
Mauri, Pierluigi [3 ]
Tavazzi, Silvia [1 ,4 ]
Grandori, Rita [2 ]
机构
[1] Univ Milano Bicocca, Dept Mat Sci, Via R Cozzi 55, I-20125 Milan, Italy
[2] Univ Milano Bicocca, Dept Biotechnol & Biosci, Piazza Sci 2, I-20126 Milan, Italy
[3] Natl Res Council ITB CNR, Inst Biomed Technol, Segrate, MI, Italy
[4] Univ Milano Bicocca, COMiB, Milan, Italy
关键词
lacrimal film; liquid biopsies; peripheral body fluids; personalized medicine; single‐ tear analysis; tear collection and fractionation methods; THYROID-ASSOCIATED ORBITOPATHY; PRIMARY OPEN-ANGLE; DRY EYE; CONTACT-LENSES; QUANTITATIVE PROTEOMICS; PROTEIN EXPRESSION; FLUID PROTEOMICS; FILM PROTEOME; BREAST-CANCER; INTER-DAY;
D O I
10.1002/mas.21691
中图分类号
O433 [光谱学];
学科分类号
0703 ; 070302 ;
摘要
The lacrimal film has attracted increasing interest in the last decades as a potential source of biomarkers of physiopathological states, due to its accessibility, moderate complexity, and responsiveness to ocular and systemic diseases. High-performance liquid chromatography-mass spectrometry (LC-MS) has led to effective approaches to tear proteomics, despite the intrinsic limitations in sample amounts. This review focuses on the recent progress in strategy and technology, with an emphasis on the potential for personalized medicine. After an introduction on lacrimal-film composition, examples of applications to biomarker discovery are discussed, comparing approaches based on pooled-sample and single-tear analysis. Then, the most critical steps of the experimental pipeline, that is, tear collection, sample fractionation, and LC-MS implementation, are discussed with reference to proteome-coverage optimization. Advantages and challenges of the alternative procedures are highlighted. Despite the still limited number of studies, tear quantitative proteomics, including single-tear investigation, could offer unique contributions to the identification of low-invasiveness, sustained-accessibility biomarkers, and to the development of personalized approaches to therapy and diagnosis.
引用
收藏
页码:842 / 860
页数:19
相关论文
共 50 条
  • [1] Biomarker discovery in mass spectrometry-based urinary proteomics
    Thomas, Samuel
    Hao, Ling
    Ricke, William A.
    Li, Lingjun
    [J]. PROTEOMICS CLINICAL APPLICATIONS, 2016, 10 (04) : 358 - 370
  • [2] Mass spectrometry-based membrane proteomics in cancer biomarker discovery
    Mermelekas, George
    Zoidakis, Jerome
    [J]. EXPERT REVIEW OF MOLECULAR DIAGNOSTICS, 2014, 14 (05) : 549 - 563
  • [3] Mass spectrometry-based proteomics: A useful tool for biomarker discovery?
    Gramolini, A. O.
    Peterman, S. M.
    Kislinger, T.
    [J]. CLINICAL PHARMACOLOGY & THERAPEUTICS, 2008, 83 (05) : 758 - 760
  • [4] Mass spectrometry-based tissue proteomics for cancer biomarker discovery
    Baigley, Brian M.
    Wang, Weijie
    De Voe, Don L.
    Lee, Cheng S.
    [J]. PERSONALIZED MEDICINE, 2007, 4 (01) : 45 - 58
  • [5] Application of mass spectrometry-based proteomics for biomarker discovery in neurological disorders
    Venugopal, Abhilash
    Chaerkady, Raghothama
    Pandey, Akhilesh
    [J]. ANNALS OF INDIAN ACADEMY OF NEUROLOGY, 2009, 12 (01) : 3 - 11
  • [6] Mass Spectrometry-Based Proteomics and Peptidomics for Biomarker Discovery in Neurodegenerative Diseases
    Wei, Xin
    Li, Lingjun
    [J]. INTERNATIONAL JOURNAL OF CLINICAL AND EXPERIMENTAL PATHOLOGY, 2009, 2 (02): : 132 - 148
  • [7] MASS SPECTROMETRY-BASED PROTEOMICS: THE ROAD TO LUNG CANCER BIOMARKER DISCOVERY
    Indovina, Paola
    Marcelli, Eleonora
    Pentimalli, Francesca
    Tanganelli, Piero
    Tarro, Giulio
    Giordano, Antonio
    [J]. MASS SPECTROMETRY REVIEWS, 2013, 32 (02) : 129 - 142
  • [8] Label-free mass spectrometry-based proteomics for biomarker discovery and validation
    Pham, Thang V.
    Piersma, Sander R.
    Oudgenoeg, Gideon
    Jimenez, Connie R.
    [J]. EXPERT REVIEW OF MOLECULAR DIAGNOSTICS, 2012, 12 (04) : 343 - 359
  • [9] Urinary biomarker discovery in gliomas using mass spectrometry-based clinical proteomics
    Wu Jianqiang
    Zhang Jun
    Wei Jing
    Zhao Yuanli
    Gao Youhe
    [J]. 中华神经外科杂志(英文), 2020, 06 (02) : 82 - 91
  • [10] Drug profiling and biomarker discovery using mass spectrometry-based proteomics technologies
    Jenne, A.
    Tebbe, A.
    Schaab, C.
    Godl, K.
    Kaminski, M.
    Mueller, S.
    [J]. JOURNAL OF BIOTECHNOLOGY, 2010, 150 : S29 - S29