Molecular dynamics simulation studies of liquid acetonitrile: New six-site model

被引:0
|
作者
Grabuleda, X
Jaime, C [1 ]
Kollman, PA
机构
[1] Univ Autonoma Barcelona, Dept Quim, E-08193 Bellaterra, Spain
[2] Univ Calif San Francisco, Dept Pharmaceut Chem, San Francisco, CA 94143 USA
关键词
acetonitrile solvent model; molecular dynamics simulation; AMBER; force field; RESP approach; thermodynamics properties and radial distribution functions;
D O I
10.1002/1096-987X(20000730)21:10<901::AID-JCC7>3.0.CO;2-F
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Molecular dynamics (MD) simulations are carried out for liquid acetonitrile using a new six-site model for the solvent molecules. The recent force field of Cornell et al. (J Am Chern Sec, 1995, 117, 5179) was used under the RESP approach to obtain the atomic charges. A new flexible all-atom solvent model was achieved whose density, heat of vaporization, and isothermal compressibility values are in good agreement with available experimental data, especially for a generic force field. Radial distribution functions are calculated and discussed to study the liquid structure in detail. (C) 2000 John Wiley & Sons, Inc.
引用
收藏
页码:901 / 908
页数:8
相关论文
共 50 条
  • [1] New six-site acetonitrile model for simulations of liquid acetonitrile and its aqueous mixtures
    Nikitin, Alexei M.
    Lyubartsev, Alexander P.
    [J]. JOURNAL OF COMPUTATIONAL CHEMISTRY, 2007, 28 (12) : 2020 - 2026
  • [2] The structure of liquid methanol: a molecular dynamics study using a six-site model
    Bianchi, L
    Adya, AK
    Kalugin, ON
    Wormald, CJ
    [J]. JOURNAL OF PHYSICS-CONDENSED MATTER, 1999, 11 (47) : 9151 - 9163
  • [3] Description of the Structure of Polystyrene with Six-Site Semiflexible Model
    Xu, Qinzhi
    Mi, Jianguo
    Zhong, Chongli
    [J]. MACROMOLECULES, 2009, 42 (07) : 2826 - 2830
  • [4] A clear observation of crystal growth of ice from water in a molecular dynamics simulation with a six-site potential model of H2O
    Nada, H
    van der Eerden, JP
    Furukawa, Y
    [J]. JOURNAL OF CRYSTAL GROWTH, 2004, 266 (1-3) : 297 - 302
  • [5] Anisotropy in geometrically rough structure of ice prismatic plane interface during growth: Development of a modified six-site model of H2O and a molecular dynamics simulation
    Nada, Hiroki
    [J]. JOURNAL OF CHEMICAL PHYSICS, 2016, 145 (24):
  • [6] Six-site polarizable model of water based on the classical Drude oscillator
    Yu, Wenbo
    Lopes, Pedro E. M.
    Roux, Benoit
    MacKerell, Alexander D., Jr.
    [J]. JOURNAL OF CHEMICAL PHYSICS, 2013, 138 (03):
  • [7] MOLECULAR-DYNAMICS SIMULATION OF LIQUID-MIXTURES OF ACETONITRILE AND CHLOROFORM
    KOVACS, H
    KOWALEWSKI, J
    LAAKSONEN, A
    [J]. JOURNAL OF PHYSICAL CHEMISTRY, 1990, 94 (19): : 7378 - 7385
  • [8] Molecular dynamics simulation study of the rotational and translational motions of liquid acetonitrile
    Hirata, Y
    [J]. JOURNAL OF PHYSICAL CHEMISTRY A, 2002, 106 (10): : 2187 - 2191
  • [9] An intermolecular potential model for the simulation of ice and water near the melting point:: A six-site model of H2O
    Nada, H
    van der Eerden, JPJM
    [J]. JOURNAL OF CHEMICAL PHYSICS, 2003, 118 (16): : 7401 - 7413
  • [10] Molecular dynamics simulation studies of liquid mercury
    Bocker, J
    Gurskii, Z
    Heinzinger, K
    [J]. METALLOFIZIKA I NOVEISHIE TEKHNOLOGII, 1996, 18 (09): : 20 - 29