The complete chloroplast genomes of Lilium tsingtauense Gilg (Liliaceae)

被引:4
|
作者
Lee, Sang-Choon [1 ,2 ]
Kim, Kyunghee [1 ,2 ,3 ]
Hwang, Yoon-Jung [4 ]
Lim, Ki-Byung [5 ]
Yang, Tae-Jin [1 ,2 ]
机构
[1] Seoul Natl Univ, Dept Plant Sci, Plant Genom & Breeding Inst, Coll Agr & Life Sci, Seoul 151921, South Korea
[2] Seoul Natl Univ, Res Inst Agr & Life Sci, Coll Agr & Life Sci, Seoul 151921, South Korea
[3] Phyzen Genom Inst, Seongnam Si, Gyeonggi Do, South Korea
[4] Sahmyook Univ, Dept Life Sci, Seoul, South Korea
[5] Kyungpook Natl Univ, Dept Hort Sci, Daegu 702701, South Korea
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2016年 / 1卷 / 01期
关键词
Chloroplast; Lilium tsingtauense; genome sequence;
D O I
10.1080/23802359.2016.1172052
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Lilium tsingtauense, known as 'Korean wheel lily' and 'Twilight lily', is a lily species naturally distributed in Korea. The complete chloroplast genome sequences of L. tsingtauense was obtained by de novo assembly using whole-genome next-generation sequencing data. The chloroplast genome of L. tsingtauense was 152,710 bp in length and consisted of four distinct regions, such as large single-copy region (82,059 bp), small single-copy region (17,619 bp) and a pair of inverted repeat regions (26,516 bp). The genome contained a total of 113 genes, including 79 protein-coding genes, 30 tRNA genes and 4 rRNA genes. Phylogenetic analysis with the reported chloroplast genomes revealed that L. tsingtauense is most closely related to Lilium hansonii, a lily species native to Korea.
引用
收藏
页码:336 / 337
页数:2
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