Modeling epidemics on adaptively evolving networks: A data-mining perspective

被引:14
|
作者
Kattis, Assimakis A. [1 ]
Holiday, Alexander [1 ]
Stoica, Ana-Andreea [2 ]
Kevrekidis, Ioannis G. [1 ,3 ,4 ]
机构
[1] Princeton Univ, Dept Chem & Biol Engn, Princeton, NJ 08544 USA
[2] Princeton Univ, Dept Math, Princeton, NJ 08544 USA
[3] Princeton Univ, Program Appl & Computat Math, Princeton, NJ 08544 USA
[4] Tech Univ Munich, Inst Adv Study, Garching, Germany
基金
美国国家科学基金会;
关键词
diffusion maps; adaptive networks; epidemics; equation-free; SIS; data mining; DYNAMICS;
D O I
10.1080/21505594.2015.1121357
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
The exploration of epidemic dynamics on dynamically evolving ("adaptive") networks poses nontrivial challenges to the modeler, such as the determination of a small number of informative statistics of the detailed network state (that is, a few "good observables") that usefully summarize the overall (macroscopic, systems-level) behavior. Obtaining reduced, small size accurate models in terms of these few statistical observables - that is, trying to coarse-grain the full network epidemic model to a small but useful macroscopic one - is even more daunting. Here we describe a data-based approach to solving the first challenge: the detection of a few informative collective observables of the detailed epidemic dynamics. This is accomplished through Diffusion Maps (DMAPS), a recently developed data-mining technique. We illustrate the approach through simulations of a simple mathematical model of epidemics on a network: a model known to exhibit complex temporal dynamics. We discuss potential extensions of the approach, as well as possible shortcomings.
引用
收藏
页码:153 / 162
页数:10
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