Complete genome sequence of Brachybacterium faecium type strain (Schefferle 6-10T)

被引:16
|
作者
Lapidus, Alla [2 ]
Pukall, Ruediger [1 ]
LaButtii, Kurt [2 ]
Copeland, Alex [2 ]
Del Rio, Tijana Glavina [2 ]
Nolan, Matt [2 ]
Chen, Feng [2 ]
Lucas, Susan [2 ]
Tice, Hope [2 ]
Cheng, Jan-Fang [2 ]
Bruce, David [2 ,3 ]
Goodwin, Lynne [2 ,3 ]
Pitluck, Sam [2 ]
Rohde, Manfred [4 ]
Goeker, Markus [1 ]
Pati, Amrita [2 ]
Ivanova, Natalia [2 ]
Mavromatis, Konstantinos [2 ]
Chen, Amy [5 ]
Palaniappan, Krishna [5 ]
D'haeseleer, Patrik [2 ,6 ]
Chain, Patrick [2 ,6 ]
Bristow, Jim [2 ]
Eisen, Jonathan A. [2 ,7 ]
Markowitz, Victor [5 ]
Hugenholtz, Philip [2 ]
Kyrpides, Nikos C. [2 ]
Klenk, Hans-Peter [1 ]
机构
[1] DSMZ German Collect Microorganisms & Cell Culture, Braunschweig, Germany
[2] DOE Joint Genome Inst, Walnut Creek, CA USA
[3] Los Alamos Natl Lab, Biosci Div, Los Alamos, NM USA
[4] HZI Helmholtz Ctr Infect Res, Braunschweig, Germany
[5] Lawrence Berkeley Natl Lab, Biol Data Management & Technol Ctr, Berkeley, CA USA
[6] Lawrence Livermore Natl Lab, Livermore, CA USA
[7] Univ Calif Davis, Genome Ctr, Davis, CA 95616 USA
来源
STANDARDS IN GENOMIC SCIENCES | 2009年 / 1卷 / 01期
关键词
mesophile; free-living; non-pathogenic; aerobic; rod-coccus growth cycle; uric acid degradation; Dermabacteraceae; MICROBIAL GENOMES; BIOCYC COLLECTION; DATABASE; SYSTEM; TOOL;
D O I
10.4056/sigs.492
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Brachybacterium faecium Collins et al. 1988 is the type species of the genus, and is of phylogenetic interest because of its location in the Dermabacteraceae, a rather isolated family within the actinobacterial suborder Micrococcineae. B. faecium is known for its rod-coccus growth cycle and the ability to degrade uric acid. It grows aerobically or weakly anaerobically. The strain described in this report is a free-living, nonmotile, Gram-positive bacterium, originally isolated from poultry deep litter. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of a member of the actinobacterial family Dermabacteraceae, and the 3,614,992 bp long single replicon genome with its 3129 protein-coding and 69 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.
引用
收藏
页码:3 / 11
页数:9
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