Construction and validation of an angiogenesis-related gene expression signature associated with clinical outcome and tumor immune microenvironment in glioma

被引:3
|
作者
Hu, Tianhao [1 ]
Wang, Yutao [2 ]
Wang, Xiaoliang [1 ]
Wang, Run [3 ]
Song, Yifu [1 ]
Zhang, Li [1 ]
Han, Sheng [1 ]
机构
[1] China Med Univ, Hosp 1, Dept Neurosurg, Shenyang, Peoples R China
[2] China Med Univ, Hosp 1, Dept Urol, Shenyang, Peoples R China
[3] Huazhong Univ Sci & Technol, Union Shenzhen Hosp, Dept Neurosurg, Shenzhen, Peoples R China
基金
中国国家自然科学基金;
关键词
angiogenesis; glioma; gene signature; prognosis; tumor immune microenvironment; CENTRAL-NERVOUS-SYSTEM; T-CELLS; GLIOBLASTOMA; BRAIN; PROGNOSIS; IMMUNOTHERAPY; LANDSCAPE; MICROGLIA; BIOMARKER; PROFILE;
D O I
10.3389/fgene.2022.934683
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Background: Glioma is the most prevalent malignant intracranial tumor. Many studies have shown that angiogenesis plays a crucial role in glioma tumorigenesis, metastasis, and prognosis. In this study, we conducted a comprehensive analysis of angiogenesis-related genes (ARGs) in glioma. Methods: RNA-sequencing data of glioma patients were obtained from TCGA and CGGA databases. Via consensus clustering analysis, ARGs in the sequencing data were distinctly classified into two subgroups. We performed univariate Cox regression analysis to determine prognostic differentially expressed ARGs and least absolute shrinkage and selection operator Cox regression to construct a 14-ARG risk signature. The CIBERSORT algorithm was used to explore immune cell infiltration, and the ESTIMATE algorithm was applied to calculate immune and stromal scores. Results: We found that the 14-ARG signature reflected the infiltration characteristics of different immune cells in the tumor immune microenvironment. Additionally, total tumor mutational burden increased significantly in the high-risk group. We combined the 14-ARG signature with patient clinicopathological data to construct a nomogram for predicting 1-, 3-, and 5-year overall survival with good accuracy. The predictive value of the prognostic model was verified in the CGGA cohort. SPP1 was a potential biomarker of glioma risk and was involved in the proliferation, invasion, and angiogenesis of glioma cells. Conclusion: In conclusion, we established and validated a novel ARG risk signature that independently predicted the clinical outcomes of glioma patients and was associated with the tumor immune microenvironment.
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页数:20
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