Charge transport properties of SARS-CoV-2 Delta variant (B.1.617.2)

被引:2
|
作者
He, Lijun [1 ]
Xie, Zhiyang [1 ]
Long, Xing [1 ]
Zhang, Chaopeng [1 ]
He, Chengyun [1 ]
Zhao, Boyang [1 ]
Qi, Fei [1 ]
Zhang, Nan [1 ]
机构
[1] Chongqing Univ Posts & Telecommun, Sch Optoelect Engn, Chongqing 400065, Peoples R China
基金
中国国家自然科学基金;
关键词
Conductance; SARS-CoV-2; B.1.617.2 (delta); RNA-DNA hybrids;
D O I
10.1016/j.procbio.2022.08.010
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The B.1.617.2 (Delta) variant of concern is causing a new wave of infections in many countries. In order to better understand the changes of the SARS-CoV-2 mutation at the genetic level, we selected six mutations in the S region of the Delta variant compared with the native SARS-CoV-2 and get the conductance information of these six short RNA oligonucleotides groups by construct RNA: DNA hybrids. The electronic characteristics are investigated by the combination of density functional theory and non-equilibrium Green's function formulation with decoherence. We found that conductance is very sensitive to small changes in virus sequence. Among the 6 mutations in the Delta S region, D950N shows the largest change in relative conductance, reaching a surprising 4104.75%. These results provide new insights into the Delta variant from the perspective of its electrical properties. This may be a new method to distinguish virus variation and possess great research prospects.
引用
收藏
页码:656 / 660
页数:5
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