Spatial and temporal dynamics of superspreading events in the 2014-2015 West Africa Ebola epidemic

被引:102
|
作者
Lau, Max S. Y. [1 ]
Dalziel, Benjamin Douglas [2 ,3 ]
Funk, Sebastian [4 ]
McClelland, Amanda [5 ]
Tiffany, Amanda [6 ]
Riley, Steven [7 ]
Metcalf, C. Jessica E. [1 ]
Grenfell, Bryan T. [1 ,8 ]
机构
[1] Princeton Univ, Dept Ecol & Evolutionary Biol, Princeton, NJ 08544 USA
[2] Oregon State Univ, Dept Integrat Biol, Corvallis, OR 97331 USA
[3] Oregon State Univ, Dept Math, Corvallis, OR 97331 USA
[4] London Sch Hyg & Trop Med, Ctr Math Modelling Infect Dis, London WC1E 7HT, England
[5] Int Federat Red Cross & Red Crescent Societies, CH-1211 Geneva 19, Switzerland
[6] Epicentre, CH-1211 Geneva 6, Switzerland
[7] Imperial Coll London, Dept Infect Dis Epidemiol, Ctr Outbreak Anal & Modelling, MRC, London SW7 2AZ, England
[8] NIH, Fogarty Int Ctr, Bethesda, MD 20892 USA
基金
美国国家卫生研究院; 英国医学研究理事会; 比尔及梅琳达.盖茨基金会;
关键词
Ebola; superspreading; offspring distribution; Bayesian inference; VIRUS DISEASE; TRANSMISSION; OUTBREAK;
D O I
10.1073/pnas.1614595114
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The unprecedented scale of the Ebola outbreak in Western Africa (2014-2015) has prompted an explosion of efforts to understand the transmission dynamics of the virus and to analyze the performance of possible containment strategies. Models have focused primarily on the reproductive numbers of the disease that represent the average number of secondary infections produced by a random infectious individual. However, these population-level estimates may conflate important systematic variation in the number of cases generated by infected individuals, particularly found in spatially localized transmission and superspreading events. Although superspreading features prominently in first-hand narratives of Ebola transmission, its dynamics have not been systematically characterized, hindering refinements of future epidemic predictions and explorations of targeted interventions. We used Bayesian model inference to integrate individual-level spatial information with other epidemiological data of community-based (undetected within clinical-care systems) cases and to explicitly infer distribution of the cases generated by each infected individual. Our results show that super-spreaders play a key role in sustaining onward transmission of the epidemic, and they are responsible for a significant proportion (similar to 61%) of the infections. Our results also suggest age as a key demographic predictor for superspreading. We also show that community-based cases may have progressed more rapidly than those notified within clinical-care systems, and most transmission events occurred in a relatively short distance (with median value of 2.51 km). Our results stress the importance of characterizing superspreading of Ebola, enhance our current understanding of its spatiotemporal dynamics, and highlight the potential importance of targeted control measures.
引用
收藏
页码:2337 / 2342
页数:6
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