Numerical Modeling of Biomolecular Electrostatic Properties by the Element-Free Galerkin Method

被引:5
|
作者
Manzin, Alessandra [1 ]
Ansalone, Domenico Patrizio [1 ]
Bottauscio, Oriano [1 ]
机构
[1] Ist Nazl Ric Metrol, Turin, Italy
关键词
Bioelectric phenomena; biological system modeling; element-free Galerkin method (EFGM); meshless methods; POISSON-BOLTZMANN EQUATION; COMPUTATION;
D O I
10.1109/TMAG.2010.2081353
中图分类号
TM [电工技术]; TN [电子技术、通信技术];
学科分类号
0808 ; 0809 ;
摘要
The element-free Galerkin method is applied to the study of the electrostatic behavior of a biomolecule inside a ionic solvent. To this aim, the attention is focused on the solution of the linearized Poisson-Boltzmann equation. The numerical results put in evidence the capability of the proposed approach to approximate the steep gradients of the electrostatic potential arising in the molecular region.
引用
收藏
页码:1382 / 1385
页数:4
相关论文
共 50 条
  • [1] Element-free Galerkin method to the interface problems with application in electrostatic
    Jannesari, Zahra
    Tatari, Mehdi
    [J]. INTERNATIONAL JOURNAL OF NUMERICAL MODELLING-ELECTRONIC NETWORKS DEVICES AND FIELDS, 2016, 29 (06) : 1089 - 1105
  • [2] An improved element-free Galerkin method for numerical modeling of the biological population problems
    Zhang, L. W.
    Deng, Y. J.
    Liew, K. M.
    [J]. ENGINEERING ANALYSIS WITH BOUNDARY ELEMENTS, 2014, 40 : 181 - 188
  • [4] Modeling microwave NDE using the element-free Galerkin method
    Zeng, ZW
    Shanker, B
    Udpa, L
    [J]. Electromagnetic Nondestructive Evaluation (IX), 2005, 25 : 41 - 48
  • [5] Modeling groundwater flow by the element-free Galerkin (EFG) method
    Yu-Chul Park
    Darrell I. Leap
    [J]. Geosciences Journal, 2000, 4 (3) : 231 - 241
  • [6] Consistent element-free Galerkin method
    Duan, Qinglin
    Gao, Xin
    Wang, Bingbing
    Li, Xikui
    Zhang, Hongwu
    Belytschko, Ted
    Shao, Yulong
    [J]. INTERNATIONAL JOURNAL FOR NUMERICAL METHODS IN ENGINEERING, 2014, 99 (02) : 79 - 101
  • [7] An element-free Galerkin method for ground penetrating radar numerical simulation
    De-shan Feng
    Rong-wen Guo
    Hong-hua Wang
    [J]. Journal of Central South University, 2015, 22 : 261 - 269
  • [8] Effect of an efficient numerical integration technique on the element-free Galerkin method
    Li, Xiaolin
    Li, Shuling
    [J]. APPLIED NUMERICAL MATHEMATICS, 2023, 193 : 204 - 225
  • [9] An element-free Galerkin method for ground penetrating radar numerical simulation
    Feng De-shan
    Guo Rong-wen
    Wang Hong-hua
    [J]. JOURNAL OF CENTRAL SOUTH UNIVERSITY, 2015, 22 (01) : 261 - 269
  • [10] Numerical prediction of crack propagation by an enhanced element-free Galerkin method
    Lee, SH
    Yoon, YC
    [J]. NUCLEAR ENGINEERING AND DESIGN, 2004, 227 (03) : 257 - 271