Advances in Sequencing and Resequencing in Crop Plants

被引:3
|
作者
Marri, Pradeep R. [1 ]
Ye, Liang [1 ]
Jia, Yi [1 ]
Jiang, Ke [1 ]
Rounsley, Steven D. [2 ]
机构
[1] Dow AgroSci, Indianapolis, IN USA
[2] Genus Plc, De Forest, WI 53532 USA
来源
关键词
Assembly; Crops; NGS; Sequencing; GENOME SEQUENCE; MAMMALIAN GENOMES; DRAFT SEQUENCE; WILD RELATIVES; PAN-GENOME; MAP; DIVERSITY; ASSEMBLIES; EVOLUTION; INSIGHTS;
D O I
10.1007/10_2017_46
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
DNA sequencing technologies have changed the face of biological research over the last 20 years. From reference genomes to population level resequencing studies, these technologies have made significant contributions to our understanding of plant biology and evolution. As the technologies have increased in power, the breadth and complexity of the questions that can be asked has increased. Along with this, the challenges of managing unprecedented quantities of sequence data are mounting. This chapter describes a few aspects of the journey so far and looks forward to what may lie ahead. [GRAPHICS] .
引用
收藏
页码:11 / 35
页数:25
相关论文
共 50 条
  • [1] Exome Sequencing and Advances in Crop Improvement
    Singh, Devi
    Singh, Pankaj K.
    Chaudhary, Sarika
    Mehla, Kamiya
    Kumar, Shashi
    [J]. ADVANCES IN GENETICS, VOL 79, 2012, 79 : 87 - 121
  • [2] Advances in Cell Wall Research of Crop Plants
    Acebes, Jose-Luis
    [J]. AGRONOMY-BASEL, 2022, 12 (10):
  • [3] Research Advances of Beneficial Microbiota Associated with Crop Plants
    Tian, Lei
    Lin, Xiaolong
    Tian, Jun
    Ji, Li
    Chen, Yalin
    Tran, Lam-Son Phan
    Tian, Chunjie
    [J]. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2020, 21 (05)
  • [4] Folates in Plants: Research Advances and Progress in Crop Biofortification
    Gorelova, Vera
    Ambach, Lars
    Rebeille, Fabrice
    Stove, Christophe
    Van Der Straeten, Dominique
    [J]. FRONTIERS IN CHEMISTRY, 2017, 5
  • [5] Whole Genome Resequencing for Crop Improvement
    Yang Bicheng
    [J]. IN VITRO CELLULAR & DEVELOPMENTAL BIOLOGY-ANIMAL, 2010, 46 : S178 - S178
  • [6] CROP GENETICS Resequencing sows the seeds
    Flintoft, Louisa
    [J]. NATURE REVIEWS GENETICS, 2010, 11 (12) : 816 - 817
  • [7] Advances in Single-Cell Transcriptome Sequencing and Spatial Transcriptome Sequencing in Plants
    Lv, Zhuo
    Jiang, Shuaijun
    Kong, Shuxin
    Zhang, Xu
    Yue, Jiahui
    Zhao, Wanqi
    Li, Long
    Lin, Shuyan
    [J]. PLANTS-BASEL, 2024, 13 (12):
  • [8] Recent advances in engineering crop plants for resistance to insect pests
    Shilpa Kamatham
    Sandhya Munagapati
    Kota Neela Manikanta
    Rohith Vulchi
    Kiranmai Chadipiralla
    Sri Hari Indla
    Uday Sankar Allam
    [J]. Egyptian Journal of Biological Pest Control, 31
  • [9] Recent advances in engineering crop plants for resistance to insect pests
    Kamatham, Shilpa
    Munagapati, Sandhya
    Manikanta, Kota Neela
    Vulchi, Rohith
    Chadipiralla, Kiranmai
    Indla, Hari
    Allam, Uday Sankar
    [J]. EGYPTIAN JOURNAL OF BIOLOGICAL PEST CONTROL, 2021, 31 (01)
  • [10] Status and Prospects of Next-generation Sequencing Technologies in Crop Plants
    Sharma, Tilak R.
    Devanna, Basavantraya N.
    Kiran, Kanti
    Singh, Pankaj K.
    Arora, Kirti
    Jain, Priyanka
    Tiwari, Ila M.
    Dubey, Himanshu
    Saklani, Banita K.
    Kumari, Mandeep
    Singh, Jyoti
    Jaswal, Rajdeep
    Kapoor, Ritu
    Pawar, Deepak V.
    Sinha, Shruti
    Bisht, Deepak S.
    Solanke, Amolkumar U.
    Mondal, Tapan K.
    [J]. CURRENT ISSUES IN MOLECULAR BIOLOGY, 2018, 27 : 1 - 36