Mining gene expression data using data mining techniques : A critical review

被引:11
|
作者
Mabu, Audu Musa [1 ]
Prasad, Rajesh [2 ]
Yadav, Raghav [1 ]
机构
[1] Sam Higginbottom Univ Agr Technol & Sci, Dept Comp Sci & Informat Technol, Allahabad 211007, Uttar Pradesh, India
[2] Amer Univ Nigeria, Sch Informat Technol & Comp, Yola 640101, Nigeria
来源
关键词
Data mining; Gene expression; Deoxyribonucleic acid (DNA); classification and clustering; CLUSTERING METHOD; CLASSIFICATION;
D O I
10.1080/02522667.2018.1555311
中图分类号
G25 [图书馆学、图书馆事业]; G35 [情报学、情报工作];
学科分类号
1205 ; 120501 ;
摘要
In the recent years, the emergence of data mining techniques in the research industries makes it possible to extract valuable information from huge volume of data. Good understanding of data mining techniques is necessary for research scholars and information industries to make use of this opportunity efficiently to improve the quality of their findings. Two most popular techniques of data mining are: clustering and classification. Clustering is an unsupervised learning method that groups the data based on distance and similarities among them. Classification assigns data items into target categories or classes with the aim of predicting the target class for each instance of data in a heterogeneous dataset accurately. This review focuses on current data mining techniques used in classification and clustering of gene expression dataset. Main attention is given to supervise and unsupervised methods that are being used recently to classify gene expression for the purpose of diagnosis and prognosis of terrifying diseases. In fact, gene expression data clustering offers a powerful approach to detect cancers from a given dataset. The various efficient algorithms available in the literature are analyzed to know their availability in the different situations.
引用
收藏
页码:723 / 742
页数:20
相关论文
共 50 条
  • [1] Critical Review of Data Mining Techniques for Gene Expression Analysis
    Aouf, Mazin
    Liyanage, Liwan
    Hansen, Stephen
    [J]. 2008 4TH INTERNATIONAL CONFERENCE ON INFORMATION AND AUTOMATION FOR SUSTAINABILITY (ICIAFS), 2008, : 198 - 202
  • [2] Automated Data Mining Techniques:A Critical Literature Review
    Asghar, Sohail
    Iqbal, Khalid
    [J]. 2009 INTERNATIONAL CONFERENCE ON INFORMATION MANAGEMENT AND ENGINEERING, PROCEEDINGS, 2009, : 75 - 79
  • [4] A review of data mining techniques
    Lee, SJ
    Siau, K
    [J]. INDUSTRIAL MANAGEMENT & DATA SYSTEMS, 2001, 101 (1-2) : 41 - 46
  • [5] Gene expression data mining
    Dutton, G
    [J]. SCIENTIST, 2002, 16 (20): : 50 - 53
  • [6] Mining gene expression data
    Mark Patterson
    [J]. Nature Reviews Genetics, 2000, 1 : 165 - 165
  • [7] Mining gene expression data
    Patterson, M
    [J]. NATURE REVIEWS GENETICS, 2000, 1 (03) : 165 - 165
  • [8] A Review On Road Accident Data Analysis Using Data Mining Techniques
    Kasbe, Prajakta S.
    Sakhare, Apeksha V.
    [J]. 2017 INTERNATIONAL CONFERENCE ON INNOVATIONS IN INFORMATION, EMBEDDED AND COMMUNICATION SYSTEMS (ICIIECS), 2017,
  • [9] DATA MINING DATA MINING CONCEPTS AND TECHNIQUES
    Agarwal, Shivam
    [J]. 2013 INTERNATIONAL CONFERENCE ON MACHINE INTELLIGENCE AND RESEARCH ADVANCEMENT (ICMIRA 2013), 2013, : 203 - 207
  • [10] Review of Data Mining Clustering Techniques to Analyze Data with High Dimensionality as Applied in Gene Expression Data (June 2008)
    Aouf, M.
    Lyanage, L.
    Hansen, S.
    [J]. 2008 5TH INTERNATIONAL CONFERENCE ON SERVICE SYSTEMS AND SERVICE MANAGEMENT, VOLS 1 AND 2, 2008, : 689 - 693