Structural analysis of full-length Hfq from Escherichia coli

被引:24
|
作者
Beich-Frandsen, Mads [1 ]
Vecerek, Branislav [2 ]
Sjoeblom, Bjoern [1 ]
Blaesi, Udo [2 ]
Djinovic-Carugo, Kristina [1 ,3 ]
机构
[1] Univ Vienna, Max F Perutz Labs, Dept Struct & Computat Biol, A-1030 Vienna, Austria
[2] Univ Vienna, Max F Perutz Labs, Dept Microbiol Immunobiol & Genet, A-1030 Vienna, Austria
[3] Univ Ljubljana, Fac Chem & Chem Technol, Dept Biochem, Ljubljana 1000, Slovenia
基金
奥地利科学基金会;
关键词
C-TERMINAL DOMAIN; X-RAY-INTENSITIES; SM-LIKE PROTEIN; CRYSTAL-STRUCTURE; DSRA RNA; CRYSTALLIZATION; INCREASES; VIRULENCE; DISORDER; COMPLEX;
D O I
10.1107/S174430911100786X
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The structure of full-length host factor Q beta (Hfq) from Escherichia coli obtained from a crystal belonging to space group P1, with unit-cell parameters a = 61.91, b = 62.15, c = 81.26 angstrom, alpha = 78.6, beta = 86.2, gamma = 59.9 degrees, was solved by molecular replacement to a resolution of 2.85 angstrom and refined to R-work and R-free values of 20.7% and 25.0%, respectively. Hfq from E. coli has previously been crystallized and the structure has been solved for the N-terminal 72 amino acids, which cover similar to 65% of the full-length sequence. Here, the purification, crystallization and structural data of the full 102-amino-acid protein are presented. These data revealed that the presence of the C-terminus changes the crystal packing of E. coli Hfq. The crystal structure is discussed in the context of the recently published solution structure of Hfq from E. coli.
引用
收藏
页码:536 / 540
页数:5
相关论文
共 50 条
  • [1] Isolation of engineered, full-length antibodies from libraries expressed in Escherichia coli
    Mazor, Yariv
    Van Blarcom, Thomas
    Mabry, Robert
    Iverson, Brent L.
    Georgiou, George
    [J]. NATURE BIOTECHNOLOGY, 2007, 25 (05) : 563 - 565
  • [2] Isolation of engineered, full-length antibodies from libraries expressed in Escherichia coli
    Yariv Mazor
    Thomas Van Blarcom
    Robert Mabry
    Brent L Iverson
    George Georgiou
    [J]. Nature Biotechnology, 2007, 25 : 563 - 565
  • [3] Expression of a full-length influenza virus hemagglutinin in Escherichia coli
    Bae, Yoonjin
    Chun, Jihwan
    Park, Wonbeom
    Kim, Seungjoo
    Kim, Soomin
    Kim, Nayeon
    Kim, Minju
    Moon, Seokoh
    Hwang, Jaehyeon
    Jung, Younghoon
    Kweon, Dae-Hyuk
    [J]. PROCESS BIOCHEMISTRY, 2023, 126 : 216 - 222
  • [4] Expression, production, and characterization of full-length vitronectin in Escherichia coli
    Wojciechowski, K
    Chang, CH
    Hocking, DC
    [J]. PROTEIN EXPRESSION AND PURIFICATION, 2004, 36 (01) : 131 - 138
  • [5] Structural and functional properties of full-length and truncated human proapolipoprotein AI expressed in Escherichia coli
    Pyle, LE
    Sawyer, WH
    Fujiwara, Y
    Mitchell, A
    Fidge, NH
    [J]. BIOCHEMISTRY, 1996, 35 (37) : 12046 - 12052
  • [6] Characterization of the Full-Length, Human Beclin-1 Purified from Escherichia Coli
    Ranaghan, Matthew
    Garvie, Colin
    Daniels, Doug
    Levine, Beth
    Perez, Jose
    [J]. BIOPHYSICAL JOURNAL, 2017, 112 (03) : 344A - 344A
  • [7] Expression of full-length human alkylglycerol monooxygenase and fragments in Escherichia coli
    Mayer, Matthias
    Keller, Markus A.
    Watschinger, Katrin
    Werner-Felmayer, Gabriele
    Werner, Ernst R.
    Golderer, Georg
    [J]. PTERIDINES, 2013, 24 (01) : 111 - 115
  • [8] Isolation of full-length IgG antibodies from combinatorial libraries expressed in the cytoplasm of Escherichia coli
    Michael-Paul Robinson
    Jinjoo Jung
    Natalia Lopez-Barbosa
    Matthew Chang
    Mingji Li
    Thapakorn Jaroentomeechai
    Emily C. Cox
    Xiaolu Zheng
    Mehmet Berkmen
    Matthew P. DeLisa
    [J]. Nature Communications, 14
  • [9] Isolation of full-length IgG antibodies from combinatorial libraries expressed in the cytoplasm of Escherichia coli
    Robinson, Michael-Paul
    Jung, Jinjoo
    Lopez-Barbosa, Natalia
    Chang, Matthew
    Li, Mingji
    Jaroentomeechai, Thapakorn
    Cox, Emily C.
    Zheng, Xiaolu
    Berkmen, Mehmet
    DeLisa, Matthew P.
    [J]. NATURE COMMUNICATIONS, 2023, 14 (01)
  • [10] Purification of functional full-length liver X receptor β produced in Escherichia coli
    Toresson, G
    Schuster, GU
    Steffensen, KR
    Bengtsson, M
    Ljunggren, J
    Dahlman-Wright, K
    Gustafsson, JÅ
    [J]. PROTEIN EXPRESSION AND PURIFICATION, 2004, 35 (02) : 190 - 198