Moving Toward Model Reproducibility and Reusability

被引:7
|
作者
Peng, Grace C. Y. [1 ]
机构
[1] Natl Inst Biomed Imaging & Bioengn, NIH, Bethesda, MD 20892 USA
关键词
Biological system modeling; biomedical computing; biomedical engineering; computational biology; computational modeling; computer simulation; reproducibility of results;
D O I
10.1109/TBME.2016.2603418
中图分类号
R318 [生物医学工程];
学科分类号
0831 ;
摘要
This paper provides a brief history of the U.S. funding initiatives associated with promoting multiscale modeling of the physiome since 2003. An effort led in the United States is the Interagency Modeling and Analysis Group (IMAG) Multiscale Modeling (MSM) Consortium. Though IMAG and the MSM Consortium have generated much interest in developing MSM models of the physiome, challenges associated with model and data sharing in biomedical, biological, and behavioral systems still exist. Since 2013, the IEEE EMBS Technical Committee on Computational Biology and the Physiome (CBaP TC) has supported discussions on promoting model reproducibility through publications. This special issue on model sharing and reproducibility is a realization of the CBaP TC discussions. Though open questions remain on how we can further facilitate model reproducibility, accessibility, and reuse by the worldwide community for different biomedical domain applications, this special issue provides a unique demonstration of both the challenges and opportunities for publishing reproducible computational models.
引用
收藏
页码:1997 / 1998
页数:2
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