Stochastic stability analysis of gene regulatory networks using hybrid systems theory

被引:0
|
作者
Mahmoud, M [1 ]
机构
[1] Univ Massachusetts, Dept Elect & Comp Engn, Lowell, MA 01854 USA
关键词
gene regulatory network; biomedical imaging; stochastic stability;
D O I
暂无
中图分类号
TP [自动化技术、计算机技术];
学科分类号
0812 ;
摘要
Upon the completion of the sequencing of the human genome, an urgent need emerged to develop tools capable of unraveling the interaction and functionality of genes. With the aid of microarray technology, large scale gene expression analyses have been conducted and several gene regulatory network models have been proposed. To establish a framework that better integrates and regulates such models, the stochastic stability properties of these models have to be defined and investigated. Such a study would uncover regimes of stable behavior under both intrinsic and extrinsic noise as well as random changes in model parameters due to abruptly changing environment conditions. In this article, stochastic stability for a class of Hybrid Gene Regulatory Network (HGRN) Models is defined. A particular interest is to study and derive conditions that guarantee asymptotic exponential stochastic stability when several random switching processes are effecting the behavior of the GRN model. A numerical example is included to demonstrate the theoretical analysis.
引用
收藏
页码:67 / 72
页数:6
相关论文
共 50 条
  • [1] Stability of stochastic gene regulatory networks using entropy methods
    Pajaro, M.
    Alonso, A. A.
    Carrillo, J. A.
    Vazquez, C.
    [J]. IFAC PAPERSONLINE, 2016, 49 (24): : 1 - 5
  • [2] Stochastic stability and its application to the analysis of gene regulatory networks
    El Samad, H
    Khammash, M
    [J]. 2004 43RD IEEE CONFERENCE ON DECISION AND CONTROL (CDC), VOLS 1-5, 2004, : 3001 - 3006
  • [3] Stochastic analysis of gene regulatory networks using moment closure
    Singh, Abhyudai
    Hespanha, Joao Pedro
    [J]. 2007 AMERICAN CONTROL CONFERENCE, VOLS 1-13, 2007, : 2800 - 2805
  • [4] Analytic solutions for stochastic hybrid models of gene regulatory networks
    Pavel Kurasov
    Delio Mugnolo
    Verena Wolf
    [J]. Journal of Mathematical Biology, 2021, 82
  • [5] Analytic solutions for stochastic hybrid models of gene regulatory networks
    Kurasov, Pavel
    Mugnolo, Delio
    Wolf, Verena
    [J]. JOURNAL OF MATHEMATICAL BIOLOGY, 2021, 82 (1-2)
  • [6] Stochastic hybrid models of gene regulatory networks - A PDE approach
    Kurasov, Pavel
    Lueck, Alexander
    Mugnolo, Delio
    Wolf, Verena
    [J]. MATHEMATICAL BIOSCIENCES, 2018, 305 : 170 - 177
  • [7] Stochastic hybrid systems: a modeling and stability theory tutorial
    Teel, Andrew R.
    Hespanha, Joao P.
    [J]. 2015 54TH IEEE CONFERENCE ON DECISION AND CONTROL (CDC), 2015, : 3116 - 3136
  • [8] Hybrid models for chemical reaction networks: Multiscale theory and application to gene regulatory systems
    Winkelmann, Stefanie
    Schuette, Christof
    [J]. JOURNAL OF CHEMICAL PHYSICS, 2017, 147 (11):
  • [9] Stability of Systems with Stochastic Delays and Applications to Genetic Regulatory Networks
    Gomez, Marcella M.
    Sadeghpour, Mehdi
    Bennett, Matthew R.
    Orosz, Gabor
    Murray, Richard M.
    [J]. SIAM JOURNAL ON APPLIED DYNAMICAL SYSTEMS, 2016, 15 (04): : 1844 - 1873
  • [10] Incremental stability analysis of stochastic hybrid systems
    Zhang, Ben-gong
    Chen, Luonan
    Aihara, Kazuyuki
    [J]. NONLINEAR ANALYSIS-REAL WORLD APPLICATIONS, 2013, 14 (02) : 1225 - 1234