Genome size variation in deep-sea amphipods

被引:29
|
作者
Ritchie, H. [1 ]
Jamieson, A. J. [2 ,3 ]
Piertney, S. B. [1 ]
机构
[1] Univ Aberdeen, Inst Biol & Environm Sci, Zool Bldg, Aberdeen AB24 2TZ, Scotland
[2] Univ Aberdeen, Oceanlab, Newburgh AB41 6AA, Aberdeen, Scotland
[3] Newcastle Univ, Sch Marine Sci & Technol, Ridley Bldg, Newcastle Upon Tyne NE1 7RU, Tyne & Wear, England
来源
ROYAL SOCIETY OPEN SCIENCE | 2017年 / 4卷 / 09期
基金
英国自然环境研究理事会;
关键词
genome size; deep sea; amphipods; gigantism; adaptation; evolution; LIFE-HISTORY TRAITS; TRANSPOSABLE ELEMENTS; MOBILE ELEMENTS; LYSIANASSOIDEA; EVOLUTION; SELECTION; LARGER; GROWTH; GENES;
D O I
10.1098/rsos.170862
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Genome size varies considerably across taxa, and extensive research effort has gone into understanding whether variation can be explained by differences in key ecological and life-history traits among species. The extreme environmental conditions that characterize the deep sea have been hypothesized to promote large genome sizes in eukaryotes. Here we test this supposition by examining genome sizes among 13 species of deep-sea amphipods from the Mariana, Kermadec and New Hebrides trenches. Genome sizes were estimated using flow cytometry and found to vary nine-fold, ranging from 4.06 pg (4.04 Gb) in Paralicella caperesca to 34.79 pg (34.02 Gb) in Alicella gigantea. Phylogenetic independent contrast analysis identified a relationship between genome size and maximum body size, though this was largely driven by those species that display size gigantism. There was a distinct shift in the genome size trait diversification rate in the supergiant amphipod A. gigantea relative to the rest of the group. The variation in genome size observed is striking and argues against genome size being driven by a common evolutionary history, ecological niche and life-history strategy in deep-sea amphipods.
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页数:9
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