Identification of a novel SLC45A2 mutation in albinism by targeted next-generation sequencing

被引:2
|
作者
Xue, J. J. [1 ]
Xue, J. F. [2 ]
Xue, H. Q. [1 ]
Guo, Y. Y. [3 ]
Liu, Y. [3 ]
Ouyang, N. [4 ]
机构
[1] Childrens Hosp Shanxi, Women Hlth Ctr Shanxi, Taiyuan, Shanxi, Peoples R China
[2] Yuncheng Cent Hosp, Yuncheng, Shanxi, Peoples R China
[3] Beijing Genom Inst Shenzhen, Shenzhen, Peoples R China
[4] Women Hlth Ctr Pingxiang, Pingxiang, Jiangxi, Peoples R China
基金
中国国家自然科学基金;
关键词
Targeted next-generation sequencing; Albinism; SLC45A2; Novel mutation; OCULOCUTANEOUS ALBINISM; GENE;
D O I
10.4238/gmr.15038743
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Albinism is a diverse group of hypopigmentary disorders caused by multiple-genetic defects. The genetic diagnosis of patients affected with albinism by Sanger sequencing is often complex, expensive, and time-consuming. In this study, we performed targeted next-generation sequencing to screen for 16 genes in a patient with albinism, and identified 21 genetic variants, including 19 known single nucleotide polymorphisms, one novel missense mutation (c.1456G>A), and one disease-causing mutation (c.478G>C). The novel mutation was not observed in 100 controls, and was predicted to be a damaging mutation by SIFT and Polyphen. Thus, we identified a novel mutation in SLC45A2 in a Chinese family, expanding the mutational spectrum of albinism. Our results also demonstrate that targeted next-generation sequencing is an effective genetic test for albinism.
引用
收藏
页数:4
相关论文
共 50 条
  • [1] Identification of Five Novel Variants in Chinese Oculocutaneous Albinism by Targeted Next-Generation Sequencing
    Qiu, Biyuan
    Ma, Tao
    Peng, Chunyan
    Zheng, Xiaoqin
    Yang, Jiyun
    GENETIC TESTING AND MOLECULAR BIOMARKERS, 2018, 22 (04) : 252 - 258
  • [2] Oculocutaneous Albinism Type IV: A Boy of Moroccan Descent With a Novel Mutation in SLC45A2
    Konno, Takayuki
    Abe, Yuko
    Kawaguchi, Masakazu
    Storm, Katrien
    Biervliet, Martine
    Courtens, Winnie
    Kono, Michihiro
    Tomita, Yasushi
    Suzuki, Tamio
    AMERICAN JOURNAL OF MEDICAL GENETICS PART A, 2009, 149A (08) : 1773 - 1776
  • [3] Mutation spectrum of the TYR and SLC45A2 genes in patients with oculocutaneous albinism
    Ko, Jung Min
    Yang, Jung-Ah
    Jeong, Seon-Yong
    Kim, Hyon-Ju
    MOLECULAR MEDICINE REPORTS, 2012, 5 (04) : 943 - 948
  • [4] Identification of a novel hypertrophic cardiomyopathy-associated mutation using targeted next-generation sequencing
    Zhao, Yue
    Feng, Yue
    Ding, Xiaoxue
    Dong, Shuwei
    Zhang, Hong
    Ding, Jiahuan
    Xia, Xueshan
    INTERNATIONAL JOURNAL OF MOLECULAR MEDICINE, 2017, 40 (01) : 121 - 129
  • [5] SLC45A2 variations in Indian oculocutaneous albinism patients
    Sengupta, Mainak
    Chaki, Moumita
    Arti, N.
    Ray, Kunal
    MOLECULAR VISION, 2007, 13 (152-56): : 1406 - 1411
  • [6] A Missense Mutation in SLC45A2 Is Associated with Albinism in Several Small Long Haired Dog Breeds
    Wijesena, Hiruni R.
    Schmutz, Sheila M.
    JOURNAL OF HEREDITY, 2015, 106 (03) : 285 - 288
  • [7] Identification of a Novel Nonsense ASPM Mutation in a Large Consanguineous Pakistani Family Using Targeted Next-Generation Sequencing
    Khan, Amjad
    Wang, Rongrong
    Han, Shirui
    Ahmad, Wasim
    Zhang, Xue
    GENETIC TESTING AND MOLECULAR BIOMARKERS, 2018, 22 (03) : 159 - 164
  • [8] Identification of a novel LMF1 nonsense mutation responsible for severe hypertriglyceridemia by targeted next-generation sequencing
    Cefalu, Angelo B.
    Spina, Rossella
    Noto, Davide
    Ingrassia, Valeria
    Valenti, Vincenza
    Giammanco, Antonina
    Fayer, Francesca
    Misiano, Gabriella
    Cocorullo, Gianfranco
    Scrimali, Chiara
    Palesano, Ornella
    Altieri, Grazia I.
    Ganci, Antonina
    Barbagallo, Carlo M.
    Averna, Maurizio R.
    JOURNAL OF CLINICAL LIPIDOLOGY, 2017, 11 (01) : 272 - 281
  • [9] IDENTIFICATION OF A NOVEL LMF1 NONSENSE MUTATION RESPONSIBLE FOR SEVERE HYPERTRIGLYCERIDEMIA BY TARGETED NEXT-GENERATION SEQUENCING
    Spina, Rossella
    Cefalu, Angelo B.
    Noto, Davide
    Ingrassia, Valeria
    Giammanco, Antonina
    Fayer, Francesca
    Misiano, Gabriella
    Scrimali, Chiara
    Altieri, Grazia I.
    Ganci, Antonina
    Barbagallo, Carlo M.
    Averna, Maurizio
    ATHEROSCLEROSIS, 2017, 263 : E99 - E99
  • [10] Targeted next-generation sequencing identification of a novel missense mutation of the SKIV2L gene in a patient with trichohepatoenteric syndrome
    Zheng, Bixia
    Pan, Jian
    Jin, Yu
    Wang, Chunli
    Liu, Zhifeng
    MOLECULAR MEDICINE REPORTS, 2016, 14 (03) : 2107 - 2110