Structural Characterization of Polyglutamine Fibrils by Solid-State NMR Spectroscopy

被引:73
|
作者
Schneider, Robert [2 ]
Schumacher, Miria C. [1 ]
Mueller, Henrik [2 ]
Nand, Deepak [3 ]
Klaukien, Volker [2 ]
Heise, Henrike [2 ]
Riedel, Dietmar [2 ]
Wolf, Gerhard [2 ]
Behrmann, Elmar [1 ]
Raunser, Stefan [1 ]
Seidel, Ralf [1 ]
Engelhard, Martin [1 ]
Baldus, Marc [3 ]
机构
[1] Max Planck Inst Mol Physiol, D-44227 Dortmund, Germany
[2] Max Planck Inst Biophys Chem, D-37077 Gottingen, Germany
[3] Univ Utrecht, Bijvoet Ctr Biomol Res, NL-3584 CH Utrecht, Netherlands
关键词
amyloid fibrils; Huntington's disease; aggregation; polyglutamine; solid-state NMR; BETA-SHEET STRUCTURE; MOLECULAR-DYNAMICS SIMULATIONS; NUCLEAR-MAGNETIC-RESONANCE; MEMBRANE-PROTEIN STRUCTURE; ALPHA-SYNUCLEIN FIBRILS; C-13' CHEMICAL-SHIFTS; AMYLOID FIBRILS; HUNTINGTONS-DISEASE; NEURODEGENERATIVE DISEASES; EXPERIMENTAL CONSTRAINTS;
D O I
10.1016/j.jmb.2011.06.045
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Protein aggregation via polyglutamine stretches occurs in a number of severe neurodegenerative diseases such as Huntington's disease. We have investigated fibrillar aggregates of polyglutamine peptides below, at, and above the toxicity limit of around 37 glutamine residues using solid-state NMR and electron microscopy. Experimental data are consistent with a dry fibril core of at least 70-80 angstrom in width for all constructs. Solid-state NMR dipolar correlation experiments reveal a largely beta-strand character of all samples and point to tight interdigitation of hydrogen-bonded glutamine side chains from different sheets. Two approximately equally frequent populations of glutamine residues with distinct sets of chemical shifts are found, consistent with local backbone dihedral angles compensating for beta-strand twist or with two distinct sets of side-chain conformations. Peptides comprising 15 glutamine residues are present as single extended beta-strands. Data obtained for longer constructs are most compatible with a superpleated arrangement with individual molecules contributing beta-strands to more than one sheet and an antiparallel assembly of strands within beta-sheets. (C) 2011 Elsevier Ltd. All rights reserved.
引用
收藏
页码:121 / 136
页数:16
相关论文
共 50 条
  • [1] Structural characterization of amyloid fibrils by solid state NMR
    Tycko, Robert
    [J]. ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2009, 238
  • [2] Structural characterization of PGRP-LC amyloid fibrils using solid-state NMR
    Shukkoor, Muhammed Bilal Abdul
    Sukumaran, Sujeesh Kizhakkekudi
    Berbon, Melanie
    Grelard, Axelle
    Lends, Alons
    Kauffmann, Brice
    Morvan, Estelle
    Habenstein, Birgit
    Coustou, Virginie
    Saupe, Sven
    Loquet, Antoine
    [J]. EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS, 2023, 52 (SUPPL 1): : S67 - S67
  • [3] Solid-State NMR Techniques for the Structural Determination of Amyloid Fibrils
    Chan, Jerry C. C.
    [J]. SOLID STATE NMR, 2012, 306 : 47 - 88
  • [4] Emerging Structural Understanding of Amyloid Fibrils by Solid-State NMR
    Meier, Beat H.
    Riek, Roland
    Bockmann, Anja
    [J]. TRENDS IN BIOCHEMICAL SCIENCES, 2017, 42 (10) : 777 - 787
  • [5] Structural and Motional Investigations of Polyglutamine-Containing Amyloid Fibrils by Magic-Angle-Spinning Solid-State NMR
    Hoop, Cody L.
    Mishra, Rakesh
    Kar, Karunakar
    Kodali, Ravindra
    Wetzel, Ronald
    van der Wel, Patrick C. A.
    [J]. BIOPHYSICAL JOURNAL, 2013, 104 (02) : 181A - 181A
  • [6] RNA Characterization by Solid-State NMR Spectroscopy
    Yang, Yufei
    Wang, Shenlin
    [J]. CHEMISTRY-A EUROPEAN JOURNAL, 2018, 24 (35) : 8698 - +
  • [7] Absolute structural constraints on amyloid fibrils from solid-state NMR spectroscopy of partially oriented samples
    Oyler, NA
    Tycko, R
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2004, 126 (14) : 4478 - 4479
  • [8] Structural characterization of monomeric and oligomeric arylamides by solution and solid-state NMR spectroscopy
    Cavallaro, S
    Cum, G
    Gallo, R
    Spadaro, A
    Visalli, G
    [J]. MAGNETIC RESONANCE IN CHEMISTRY, 2002, 40 (03) : 219 - 224
  • [9] Biological solid-state NMR spectroscopy in structural biology
    Lakomek N.-A.
    [J]. BIOspektrum, 2021, 27 (3) : 257 - 259
  • [10] Peptide structural analysis by solid-state NMR spectroscopy
    Bechinger, B
    Kinder, R
    Helmle, M
    Vogt, TCB
    Harzer, U
    Schinzel, S
    [J]. BIOPOLYMERS, 1999, 51 (03) : 174 - 190