Intraspecific variation and phylographic patterns of the grey-capped greenfinch Chloris sinica ssp. (Passeriformes: Fringillidae)

被引：0

作者：

Kim, Joo-Eun ^{[1
]}

Park, Jong-Gil ^{[1
,2
]}

Jin, Kyoung-Soon ^{[2
]}

Park, Chungoo ^{[3
]}

Nam, Dong-Ha ^{[1
]}

机构：

[1] Chonnam Natl Univ, Coll Nat Sci, Dept Biol Sci, 77 Yongbong Ro, Gwangju 500757, South Korea

[2] Korea Natl Pk Serv, Korea Natl Pk Res Inst, Birds Res Ctr, Jeollanam Do, South Korea

[3] Chonnam Natl Univ, Coll Nat Sci, Sch Biol Sci & Technol, 77 Yongbong Ro, Gwangju 500757, South Korea

来源：

MITOCHONDRIAL DNA PART B-RESOURCES | 2018年 / 3卷 / 02期

基金：

新加坡国家研究基金会;

关键词：

Chloris sinica; Fringillidae; mitochondrial genome;

D O I：

10.1080/23802359.2018.1491336

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

To study the intraspecific variation of the grey-capped greenfinch Chloris sinica (Passeriformes: Fringillidae), we sequenced complete mitochondria] (mt) genome of the C. sinica ssp. prevalent in Ulleung Island, Republic of Korea. The full length of the genome is 16,812 bp, containing 37 genes (2 rRNAs, 13 proteins, and 22 tRNAs) with a putative control region (D-loop). A total of 98 single nucleotide polymorphisms (SNPs) in the full mt genome were retained for Ulleung Island population and these SNPs were greater than those of inland population compared to the reference China subspecies. The analysis of the SNPs revealed 18 SNPs for ND4 gene, with a dominant haplotype shared by Ulleung population compared to the reference China population. The phylogenetic analysis of the C. sinica subspecies showed that they are monophyletic, however, there is clear phylogenetic separation between China and Korea subspecies with strong support (100% bootstrap). These data will provide new insights into reconstruct the intraspecific phylogeographical patterns of C. sinica species.

引用

页码：833 / 834

页数：2