RNA-seq of peripheral blood mononuclear cells of congenital generalized lipodystrophy type 2 patients

被引:4
|
作者
Huang, Yen-Hua [1 ,2 ]
Su, Tzu-Chien [1 ]
Wang, Chung-Hsing [3 ,4 ]
Wong, Siew-Lee [5 ]
Chien, Yin-Hsiu [6 ]
Wang, Yu-Tai [7 ]
Hwu, Wuh-Liang [6 ]
Lee, Ni-Chung [6 ]
机构
[1] Natl Yang Ming Univ, Inst Biomed Informat, Taipei, Taiwan
[2] Natl Yang Ming Univ, Ctr Syst & Synthet Biol, Taipei, Taiwan
[3] China Med Univ, Childrens Hosp, Dept Pediat, Taichung, Taiwan
[4] China Med Univ, Sch Med, Taichung, Taiwan
[5] Chia Yi Christian Hosp, Ditmanson Med Fdn, Dept Pediat, Chiayi, Taiwan
[6] Natl Taiwan Univ Hosp, Dept Pediat & Med Genet, Taipei, Taiwan
[7] Natl Ctr High Performance Comp, Natl Appl Res Labs, Hsinchu, Taiwan
关键词
MUTATION; GENE; DEFICIENCY; AGPAT2; LEPTIN;
D O I
10.1038/s41597-021-01040-4
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Illumina RNA-seq analysis was used to characterize the whole transcriptomes of peripheral blood mononuclear cells (PBMCs) from patients with congenital generalized lipodystrophy. RNA-seq information for seven patients with type 2 congenital generalized lipodystrophy (CGL2; Berardinelli-Seip congenital lipodystrophy, BSCL2) was obtained and compared with similar information for seven age- and sex-matched healthy control subjects. All seven CGL2 patients carried biallelic pathogenic mutations affecting the BSCL2 gene and had clinical symptoms of varying severity. The findings provide the whole-transcriptome signatures of PBMCs of CGL2 patients, allowing further exploration of gene expression patterns/signatures associated with the various clinical symptoms of patients with this disease.
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页数:7
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