A Spatiotemporal Model of Polarity and Spatial Gradient Establishment in Caulobacter crescentus

被引:1
|
作者
Xu, Chunrui [1 ]
Cao, Yang [2 ]
机构
[1] Virginia Tech, Genet Bioinformat & Computat Biol, Blacksburg, VA USA
[2] Virginia Tech, Dept Comp Sci, Blacksburg, VA 24061 USA
基金
美国国家科学基金会;
关键词
Scaffolding proteins; Spatial gradient; Asymmetric cell cycle; Reaction-diffusion model; ASYMMETRIC DIVISION CYCLE; CELL-FATE ASYMMETRY; DNA-REPLICATION; PHOSPHORYLATION; LOCALIZATION; REGULATOR; PROTEINS; PATTERN; DRIVES; PODJ;
D O I
10.1145/3459930.3469539
中图分类号
TP39 [计算机的应用];
学科分类号
081203 ; 0835 ;
摘要
Bacterial cells have sophisticated intracellular organization of proteins in space and time, which allows for stress response, signal transduction, cell differentiation and morphogenesis. The mechanisms of spatial localization and their contributions to cell development and adaptability are not fully understood. In this work, we use the bacterial model organism, Caulobacter cescentus, to investigate the establishment of polarity and asymmetry. We apply a reaction-diffusion model to simulating the spatiotemporal dynamics of scaffolding proteins PodJ and PopZ, which account for the formation of distinct poles in C. crescentus. Additionally, we use this mathematical model to investigate the nonuniform distribution of key kinase DivJ and phosphatase PleC and figure out their contributions to the spatial gradient of response regulators DivK and CtrA.
引用
收藏
页数:10
相关论文
共 50 条
  • [1] Polarity and cell fate asymmetry in Caulobacter crescentus
    Tsokos, Christos G.
    Laub, Michael T.
    CURRENT OPINION IN MICROBIOLOGY, 2012, 15 (06) : 744 - 750
  • [2] Spatial regulation in Caulobacter crescentus
    Thanbichler, Martin
    CURRENT OPINION IN MICROBIOLOGY, 2009, 12 (06) : 715 - 721
  • [3] Understanding the Asymmetric MipZ Gradient in Caulobacter Crescentus
    Stilwell, Matthew D.
    Radzinski, Nikolai P.
    Weisshaar, James C.
    Weibel, Douglas B.
    BIOPHYSICAL JOURNAL, 2017, 112 (03) : 312A - 312A
  • [4] Caulobacter crescentus: model system extraordinaire
    Govers, Sander K.
    Jacobs-Wagner, Christine
    CURRENT BIOLOGY, 2020, 30 (19) : R1151 - R1158
  • [5] Advantages and mechanisms of polarity and cell shape determination in Caulobacter crescentus
    Lawler, Melanie L.
    Brun, Yves V.
    CURRENT OPINION IN MICROBIOLOGY, 2007, 10 (06) : 630 - 637
  • [6] A stochastic spatiotemporal model of a response-regulator network in the Caulobacter crescentus cell cycle
    Li, Fei
    Subramanian, Kartik
    Chen, Minghan
    Tyson, John J.
    Cao, Yang
    PHYSICAL BIOLOGY, 2016, 13 (03)
  • [7] TEMPORAL AND SPATIAL REGULATION OF DIFFERENTIATION IN CAULOBACTER-CRESCENTUS
    NEWTON, A
    MICROBIOLOGICAL SCIENCES, 1987, 4 (11): : 338 - 341
  • [8] Spatial Organization and Dynamics of RNA Processing in Caulobacter Crescentus
    Bayas, Camille
    Wang, Jiarui
    Lee, Marissa K.
    Schrader, Jared M.
    Shapiro, Lucy
    Moerner, W. E.
    BIOPHYSICAL JOURNAL, 2018, 114 (03) : 251A - 251A
  • [9] Computational model of the division cycle of Caulobacter crescentus
    Brazhnik, Paul
    Li, Shenghua
    Sobral, Bruno
    Tyson, John J.
    COMPUTATIONAL MODELS FOR LIFE SCIENCES (CMLS 07), 2007, 952 : 219 - +
  • [10] Core-oscillator model of Caulobacter crescentus
    Vandecan, Yves
    Biondi, Emanuele
    Blossey, Ralf
    PHYSICAL REVIEW E, 2016, 93 (06)