Quantitation of HIV-1 RNA in dried blood spots by the real-time NucliSENS EasyQ HIV-1 assay in Senegal

被引:48
|
作者
Kane, Coumba Toure [1 ]
Ndiaye, Halimatou Diop [1 ]
Diallo, Sada [1 ]
Ndiaye, Ibrahima [1 ]
Wade, Abdoulaye Sidibe [2 ]
Diaw, Papa Alassane [1 ]
Gaye-Diallo, Aissatou [1 ]
Mboup, Souleymane [1 ]
机构
[1] Lab Bacteriol Virol CHU A Dantec, Dakar, Senegal
[2] Minist Hlth, Div AIDS IST, Dakar, Senegal
关键词
dried blood spot; HIV-1; RNA; real-time detection; developing countries;
D O I
10.1016/j.jviromet.2007.11.011
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Measurement of viral load in plasma remains the best marker for the follow-up of antiretroviral therapy. However, its use is limited in developing countries due to the lack of adequate facilities and equipment, and cryopreservation of plasma during storage and transportation. Practical and reliable methods adapted to field conditions for the collection, transportation and accurate measurement of HIV-1 viral load are needed for the optimum use of antiretroviral therapy in resource-limited countries. This study evaluated the use of dried blood spots (DBS) for the real-time quantitation of HIV-1 RNA levels with the NucliSENS EasyQ (R) HIV-1 assay (bioMerieux, Lyon, France) under field conditions in Senegal (Africa). Dried blood spots and plasma from 41 patients living in suburban Dakar were used for determination of HIV-1 RNA concentrations and stability at 37 degrees C. Analysis was performed at the Dakar University Hospital laboratory. Extraction was done with the bioMerieux NucliSENS (R) miniMAG (TM), and real-time detection was done with the bioMerieux NucliSENS (R) EasyQ system. HIV-1 RNA concentrations in plasma were compared with concentrations in dried blood spots after 8 and 15 days at 37 degrees C. The study showed a strong concordance in RNA levels between plasma and dried blood spots, which appear to be very stable over time with no apparent degradation observed after 2 weeks at 37 degrees C (mean difference 0.065 log IU/ml). These results suggest that the use of dried blood spots in combination with the NucliSENS EasyQ HIV-1 assay is well adapted for HIV-1 RNA level monitoring in centralized laboratories in developing countries. (C) 2007 Elsevier B.V. All rights reserved.
引用
收藏
页码:291 / 295
页数:5
相关论文
共 50 条
  • [1] Quantitative detection of HIV-1 RNA using NucliSens EasyQ HIV-1 assay
    Yao, J
    Liu, Z
    Ko, LS
    Pan, G
    Jiang, Y
    [J]. JOURNAL OF VIROLOGICAL METHODS, 2005, 129 (01) : 40 - 46
  • [2] Quantitation of HIV-1 RNA in dried blood and plasma spots
    Reigadas, S.
    Schrive, M. H.
    Aurillac-Lavignolle, V.
    Fleury, H. J.
    [J]. JOURNAL OF VIROLOGICAL METHODS, 2009, 161 (01) : 177 - 180
  • [3] Evaluation of the NucliSens EasyQ HIV-1 v1.1 and RealTime HIV-1 kits for quantitation of HIV-1 RNA in plasma
    Choi, Ju-yeon
    Kim, Eun-Jin
    Rho, Hyun Joo
    Kim, Jin Young
    Kwon, Oh-Kyung
    Lee, Jin-Hee
    Koo, Min Jee
    Kim, Sung Soon
    [J]. JOURNAL OF VIROLOGICAL METHODS, 2009, 161 (01) : 7 - 11
  • [4] A novel Real Time HIV-1 Qualitative assay for the detection of HIV-1 nucleic acids in dried blood spots and plasma
    Huang, Shihai
    Erickson, Brian
    Mak, Wai Bing
    Salituro, John
    Abravaya, Klara
    [J]. JOURNAL OF VIROLOGICAL METHODS, 2011, 178 (1-2) : 216 - 224
  • [5] Multicenter evaluation of the NucliSens EasyQ HIV-1 v1.1 assay for the quantitative detection of HIV-1 RNA in plasma
    de Mendoza, C
    Koppelman, M
    Montès, B
    Ferre, V
    Soriano, V
    Cuypers, H
    Segondy, M
    Oosterlaken, T
    [J]. JOURNAL OF VIROLOGICAL METHODS, 2005, 127 (01) : 54 - 59
  • [6] Comparison of the NucliSENS EasyQ HIV-1 v2.0 with Abbott m2000rt RealTime HIV-1 assay for plasma RNA quantitation in different HIV-1 subtypes
    Gomes, Perpetua
    Carvalho, Ana Patricia
    Diogo, Isabel
    Goncalves, Fatima
    Costa, Ines
    Cabanas, Joaquim
    Camacho, Ricardo Jorge
    [J]. JOURNAL OF VIROLOGICAL METHODS, 2013, 193 (01) : 18 - 22
  • [7] Dried blood spots versus plasma for the quantitation of HIV-1 RNA using a real-Time PCR, m2000rt assay
    Vidya, Madhavan
    Saravanan, Shanmugam
    Rifkin, Samara
    Solomon, Sunil S.
    Waldrop, Greer
    Mayer, Kenneth H.
    Solomon, Suniti
    Balakrishnan, Pachamuthu
    [J]. JOURNAL OF VIROLOGICAL METHODS, 2012, 181 (02) : 177 - 181
  • [8] Quantification of HIV-1 RNA on dried blood spots
    Johannessen, Asgeir
    [J]. AIDS, 2010, 24 (03) : 475 - 476
  • [9] HIV-1 RNA quantification in plasma specimens using nuclisens easyQ HIV-1 V2.0
    Oosterlaken, T.
    van Deursen, P.
    Jurriaans, S.
    Ligeon, V.
    Bertens, L.
    de Jong, J.
    [J]. JOURNAL OF CLINICAL VIROLOGY, 2009, 46 : S27 - S27
  • [10] Correlation between Human Immunodeficiency Virus Type 1 (HIV-1) RNA Measurements Obtained with Dried Blood Spots and Those Obtained with Plasma by Use of Nuclisens EasyQ HIV-1 and Abbott RealTime HIV Load Tests
    Garrido, Carolina
    Zahonero, Natalia
    Corral, Angelica
    Arredondo, Miguel
    Soriano, Vincent
    de Mendoza, Carmen
    [J]. JOURNAL OF CLINICAL MICROBIOLOGY, 2009, 47 (04) : 1031 - 1036