NEST Desktop, an Educational Application for Neuroscience

被引:8
|
作者
Spreizer, Sebastian [1 ,2 ,3 ,4 ,5 ,6 ]
Senk, Johanna [3 ,4 ,5 ]
Rotter, Stefan [1 ,2 ]
Diesmann, Markus [3 ,4 ,5 ,7 ,8 ]
Weyers, Benjamin [6 ]
机构
[1] Univ Freiburg, Fac Biol, D-79104 Freiburg, Germany
[2] Univ Freiburg, Bernstein Ctr Freiburg, D-79104 Freiburg, Germany
[3] Julich Res Ctr, Inst Neurosci & Med INM 6, D-52428 Julich, Germany
[4] Julich Res Ctr, Inst Adv Simulat IAS 6, D-52428 Julich, Germany
[5] Julich Res Ctr, Julich Aachen Res Alliance JARA, Inst Brain Struct Funct Relationships INM 10, D-52428 Julich, Germany
[6] Univ Trier, Dept Comp Sci, D-54296 Trier, Germany
[7] Rhein Westfal TH Aachen Univ, Sch Med, Dept Psychiat Psychotherapy & Psychosomat, D-52074 Aachen, Germany
[8] Rhein Westfal TH Aachen Univ, Dept Phys, Fac 1, D-52074 Aachen, Germany
基金
欧盟地平线“2020”;
关键词
code generation; graphical user interface; NEST simulator; neuronal dynamics; teaching; web-based application; NETWORKS; SIMULATION; NEURONS;
D O I
10.1523/ENEURO.0274-21.2021
中图分类号
Q189 [神经科学];
学科分类号
071006 ;
摘要
Simulation software for spiking neuronal network models matured in the past decades regarding performance and flexibility. But the entry barrier remains high for students and early career scientists in computational neuroscience since these simulators typically require programming skills and a complex installation. Here, we describe an installation-free Graphical User Interface (GUI) running in the web browser, which is distinct from the simulation engine running anywhere, on the student's laptop or on a supercomputer. This architecture provides robustness against technological changes in the software stack and simplifies deployment for self-education and for teachers. Our new open-source tool, NEST Desktop, comprises graphical elements for creating and configuring network models, running simulations, and visualizing and analyzing the results. NEST Desktop allows students to explore important concepts in computational neuroscience without the need to learn a simulator control language before. Our experiences so far highlight that NEST Desktop helps advancing both quality and intensity of teaching in computational neuroscience in regular university courses. We view the availability of the tool on public resources like the European ICT infrastructure for neuroscience EBRAINS as a contribution to equal opportunities.
引用
收藏
页数:13
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