Isolation and characterization of polymorphic microsatellite markers in Metasequoia glyptostroboides (Taxodiaceae)

被引:6
|
作者
Cui, Min-Yan [1 ]
Yu, Shuo [1 ]
Liu, Min [1 ]
Li, Yuan-Yuan [1 ,2 ]
机构
[1] E China Normal Univ, Dept Environm Sci, Shanghai Key Lab Ecol Proc & Restorat, Shanghai 200062, Peoples R China
[2] Tiantong State Observat Stn Forest Ecosyst, Shanghai 200062, Peoples R China
基金
中国国家自然科学基金;
关键词
Metasequoia glyptostroboides; Microsatellite loci; Conservation; Genetic diversity; POPULATIONS; RAPD;
D O I
10.1007/s12686-009-9132-6
中图分类号
X176 [生物多样性保护];
学科分类号
090705 ;
摘要
Metasequoia glyptostroboides is an endangered plant endemic to China. Eleven polymorphic microsatellite loci were successfully isolated from M. glyptostroboides. The number of alleles per locus ranged from 2 to 6. The observed (H(O)) and expected (H(E)) heterozygosities ranged from 0.1842 to 0.8421 and 0.2389 to 0.6639, respectively. Polymorphism information content ranged from 0.2172 to 0.5901. No significant linkage disequilibrium was observed between the loci. Four loci showed significant deviations from Hardy-Weinberg equilibrium. These 11 effective primer pairs are expected to be useful for further studies on population genetics, mating system analysis, and conservation genetics in M. glyptostroboides.
引用
收藏
页码:19 / 21
页数:3
相关论文
共 50 条
  • [1] Isolation and characterization of polymorphic microsatellite markers in Metasequoia glyptostroboides (Taxodiaceae)
    Min-Yan Cui
    Shuo Yu
    Min Liu
    Yuan-Yuan Li
    Conservation Genetics Resources, 2010, 2 : 19 - 21
  • [2] A review of the typification of Metasequoia glyptostroboides (Taxodiaceae)
    Ma, JS
    Barringer, K
    Clemants, S
    TAXON, 2005, 54 (02) : 475 - 476
  • [3] Variation of cuticle micromorphology of Metasequoia glyptostroboides (Taxodiaceae)
    Leng, Q
    Yang, H
    Yang, Q
    Zhou, JP
    BOTANICAL JOURNAL OF THE LINNEAN SOCIETY, 2001, 136 (02) : 207 - 219
  • [4] Isolation and characterization of polymorphic microsatellite markers for Alternaria alternata
    Tran-Dinh, N
    Hocking, A
    MOLECULAR ECOLOGY NOTES, 2006, 6 (02): : 405 - 407
  • [5] Isolation and characterization of polymorphic microsatellite markers in Anthyllis vulneraria
    Van Glabeke, S.
    Coart, E.
    Honnay, O.
    Roldan-Ruiz, I.
    MOLECULAR ECOLOGY NOTES, 2007, 7 (03): : 477 - 479
  • [6] Isolation and characterization of polymorphic microsatellite markers for Eupleurogrammus muticus
    Liu, Shufang
    Zu, Dangmin
    Liu, Qi
    Dai, Fangqun
    Ma, Qian
    Zhuang, Zhimeng
    CONSERVATION GENETICS RESOURCES, 2015, 7 (02) : 487 - 488
  • [7] Isolation and Characterization of Polymorphic Microsatellite Markers in Toxicodendron vernicifluum
    Dinh-Duy Vu
    Thi Tuyet-Xuan Bui
    Thi Hong-Nhung Nguyen
    Shah, Syed Noor Muhammad
    Ngoc-Ha Vu
    Zhu, Ya-Hong
    Zhang, Lei
    Zhang, Yi
    Huang, Xiao-Hua
    CZECH JOURNAL OF GENETICS AND PLANT BREEDING, 2018, 54 (01) : 17 - 25
  • [8] Isolation and characterization of polymorphic microsatellite markers for Eupleurogrammus muticus
    Shufang Liu
    Dangmin Zu
    Qi Liu
    Fangqun Dai
    Qian Ma
    Zhimeng Zhuang
    Conservation Genetics Resources, 2015, 7 : 487 - 488
  • [9] Isolation and characterization of 20 polymorphic microsatellite markers in Macrobrachium nipponense
    Yan Zhao
    Hui Wang
    Xiangshan Ji
    Yongqing Zeng
    Pingping Yang
    Lei Ding
    Conservation Genetics Resources, 2010, 2 : 137 - 139
  • [10] Isolation and characterization of novel polymorphic microsatellite markers for Epinephelus akaara
    Xie, Z. Z.
    Zheng, L. Y.
    Tang, L.
    Tang, Z. J.
    Li, S. S.
    Zhang, Y.
    Lin, H. R.
    GENETICS AND MOLECULAR RESEARCH, 2015, 14 (04) : 13663 - 13666