A fast Hankel matrix nonconvex factorization reconstruction method with inertia momentum for non-uniformly sampled NMR spectroscopy

被引:3
|
作者
Lang, Jun [1 ,2 ]
Cheng, Da [1 ]
机构
[1] Northeastern Univ, Coll Comp Sci & Engn, Shenyang 110819, Peoples R China
[2] Northeastern Univ, Minist Educ, Key Lab Intelligent Comp Med Image, Shenyang 110819, Peoples R China
基金
中国国家自然科学基金;
关键词
Low-rank Hankel matrix; Matrix nonconvex factorization; Singular value decomposition; Inertia momentum; Adaptive strategy; THRESHOLDING ALGORITHM; MINIMIZATION; RECOVERY; SPECTRA;
D O I
10.1016/j.dsp.2021.103171
中图分类号
TM [电工技术]; TN [电子技术、通信技术];
学科分类号
0808 ; 0809 ;
摘要
Multidimensional nuclear magnetic resonance (NMR) spectroscopy is one of the most powerful tools for qualitative or quantitative analysis of the composition and structure of various organic and inorganic substances. However, the time required to acquire NMR signals increases exponentially with dimensionality. Therefore, non-uniform sampling is commonly adopted to accelerate data acquisition and then the complete spectrum can be obtained by reconstruction method. At present, the state-of-the-art reconstruction methods are based on the idea of low-rank Hankel matrix completion and solved by different singular value thresholding methods. However, the computation of singular value decomposition (SVD) is very time-consuming, especially for high-resolution spectra. In this paper, we proposed a Hankel matrix nonconvex factorization optimization model to avoid SVD, thus greatly reducing the computational time. We developed a numerical algorithm based on the linearized Alternating direction method of multipliers to solve the proposed optimization problem, and Nesterov momentum is adopted to accelerate the convergence of the algorithm. However, for nonconvex model, the high quality reconstruction can only be obtained when the number of the spectral peaks is known. Thus we designed an adaptive strategy to alleviate this problem. Experiments are performed to demonstrate that the proposed algorithm can obtain higher quality reconstruction in less computational time than low rank Hankel matrix factorization and fast iterative hard thresholding methods. (C) 2021 Elsevier Inc. All rights reserved.
引用
收藏
页数:10
相关论文
共 24 条
  • [1] A Fast Low Rank Hankel Matrix Factorization Reconstruction Method for Non-Uniformly Sampled Magnetic Resonance Spectroscopy
    Guo, Di
    Lu, Hengfa
    Qu, Xiaobo
    [J]. IEEE ACCESS, 2017, 5 : 16033 - 16039
  • [2] Non-uniformly sampled 2D NMR Spectroscopy reconstruction based on Low Rank Hankel Matrix Fast Tri-Factorization and Non-convex Factorization
    Lang, Jun
    Lin, Chongyang
    [J]. JOURNAL OF COMPUTATIONAL SCIENCE, 2023, 71
  • [3] A fast low rank Vandermonde factorization reconstruction method for non-uniformly sampled 2D NMR spectroscopy
    Lang, Jun
    Cheng, Da
    [J]. DIGITAL SIGNAL PROCESSING, 2021, 118
  • [4] A partial sum of singular-value-based reconstruction method for non-uniformly sampled NMR spectroscopy
    Tu, Zhangren
    Wang, Zi
    Zhan, Jiaying
    Huang, Yihui
    Du, Xiaofeng
    Xiao, Min
    Qu, Xiaobo
    Guo, Di
    [J]. IET SIGNAL PROCESSING, 2021, 15 (01) : 14 - 27
  • [5] FAST ALGORITHM FOR NON-UNIFORMLY SAMPLED SIGNAL SPECTRUM RECONSTRUCTION
    Zhu Zhenqian
    Zhang Zhimin
    Wang Yu
    [J]. Journal of Electronics(China), 2013, 30 (03) : 231 - 236
  • [6] A Fast Self-Learning Subspace Reconstruction Method for Non-Uniformly Sampled Nuclear Magnetic Resonance Spectroscopy
    Tu, Zhangren
    Liu, Huiting
    Zhan, Jiaying
    Guo, Di
    [J]. APPLIED SCIENCES-BASEL, 2020, 10 (11):
  • [7] Compressed sensing: Reconstruction of non-uniformly sampled multidimensional NMR data
    Bostock, Mark
    Nietlispach, Daniel
    [J]. CONCEPTS IN MAGNETIC RESONANCE PART A, 2017, 46A (02)
  • [8] Reconstruction of non-uniformly sampled seismic data based on fast POCS algorithm
    Dong L.
    Zhang M.
    Wang C.
    An X.
    Guo Z.
    Fan H.
    [J]. Shiyou Diqiu Wuli Kantan/Oil Geophysical Prospecting, 2023, 58 (02): : 334 - 339
  • [9] Gridding and fast Fourier transformation on non-uniformly sparse sampled multidimensional NMR data
    Jiang, Bin
    Jiang, Xianwang
    Xiao, Nan
    Zhang, Xu
    Jiang, Ling
    Mao, Xi-an
    Liu, Maili
    [J]. JOURNAL OF MAGNETIC RESONANCE, 2010, 204 (01) : 165 - 168
  • [10] Application of iterative soft thresholding for fast reconstruction of NMR data non-uniformly sampled with multidimensional Poisson Gap scheduling
    Hyberts, Sven G.
    Milbradt, Alexander G.
    Wagner, Andreas B.
    Arthanari, Haribabu
    Wagner, Gerhard
    [J]. JOURNAL OF BIOMOLECULAR NMR, 2012, 52 (04) : 315 - 327