Diversity of an uncommon elastic hypersaline microbial mat along a small-scale transect

被引:8
|
作者
Espinosa-Asuar, Laura [1 ]
Monroy-Guzman, Camila [1 ]
Madrigal-Trejo, David [1 ]
Navarro-Miranda, Marisol [1 ]
Sanchez-Perez, Jazmin [1 ]
Buenrostro Munoz, Jhoselinne [1 ]
Villar, Juan [2 ]
Cifuentes Camargo, Julian Felipe [2 ]
Kalambokidis, Maria [1 ]
Esquivel-Hernandez, Diego A. [1 ]
Viladomat Jasso, Mariette [1 ]
Escalante, Ana E. [3 ]
Velez, Patricia [4 ]
Figueroa, Mario [5 ]
Martinez-Cardenas, Anahi [5 ]
Ramirez-Barahona, Santiago [4 ]
Gasca-Pineda, Jaime [1 ]
Eguiarte, Luis E. [1 ]
Souza, Valeria [1 ]
机构
[1] Univ Nacl Autonoma Mexico, Inst Ecol, Dept Ecol Evolut, Cdmx, Mexico
[2] Pontificia Univ Javeriana, Bogota, Colombia
[3] Univ Nacl Autonoma Mexico, Inst Ecol, Lab Nacl Ciencias Sostenibilidad, Cdmx, Mexico
[4] Univ Nacl Autonoma Mexico, Inst Biol, Dept Bot, Cdmx, Mexico
[5] Univ Nacl Autonoma Mexico, Fac Quim, Cdmx, Mexico
来源
PEERJ | 2022年 / 10卷
关键词
Cuatro Cienegas Coahuila; Microbial communities; Phylogenetic diversity; Rare biosphere; Metabolome analysis; CUATRO CIENEGAS BASIN; COMPARATIVE METAGENOMICS; MOLECULAR ECOLOGY; SP-NOV; ANTIBIOTICS; COMMUNITIES; CONSERVATION; ENVIRONMENT; METABOLITES; TOLERANCE;
D O I
10.7717/peerj.13579
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
We evaluated the microbial diversity and metabolome profile of an uncommon hypersaline elastic microbial mat from Cuatro Cienegas Basin (CCB) in the Chihuahuan Desert of Coahuila, Mexico. We collected ten samples on a small scale transect (1.5-m) and described its microbial diversity through NGS-based ITS and 16S rDNA gene sequencing. A very low number of taxa comprised a considerable proportion of the mat and were shared across all sampling points, whereas the rare biosphere was more phylogenetically diverse (Faith's Phylogenetic Diversity (FPD) index) and phylogenetically disperse (using a null model distribution of Phylogenetic Species Clustering (nmdPSC)) than the abundant (high read count) taxa for both analyzed libraries. We also found a distinctive metabolome profile for each sample and were able to tentatively annotate several classes of compounds with relevant biological properties.
引用
收藏
页数:30
相关论文
共 50 条
  • [1] Eucaryotic diversity in a hypersaline microbial mat
    Feazel, Leah M.
    Spear, John R.
    Berger, Alicia B.
    Harris, J. Kirk
    Frank, Daniel N.
    Ley, Ruth E.
    Pace, Norman R.
    APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2008, 74 (01) : 329 - 332
  • [2] Diversity and Stratification of Archaea in a Hypersaline Microbial Mat
    Robertson, Charles E.
    Spear, John R.
    Harris, J. Kirk
    Pace, Norman R.
    APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2009, 75 (07) : 1801 - 1810
  • [3] Analysis of diurnal and vertical microbial diversity of a hypersaline microbial mat
    Villanueva, Laura
    Navarrete, Antoni
    Urmeneta, Jordi
    White, David C.
    Guerrero, Ricardo
    ARCHIVES OF MICROBIOLOGY, 2007, 188 (02) : 137 - 146
  • [4] Analysis of diurnal and vertical microbial diversity of a hypersaline microbial mat
    Laura Villanueva
    Antoni Navarrete
    Jordi Urmeneta
    David C. White
    Ricardo Guerrero
    Archives of Microbiology, 2007, 188 : 137 - 146
  • [5] Unexpected diversity and complexity of the Guerrero Negro hypersaline microbial mat
    Ley, Ruth E.
    Harris, J. Kirk
    Wilcox, Joshua
    Spear, John R.
    Miller, Scott R.
    Bebout, Brad M.
    Maresca, Julia A.
    Bryant, Donald A.
    Sogin, Mitchell L.
    Pace, Norman R.
    APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2006, 72 (05) : 3685 - 3695
  • [6] High Diversity of Culturable Prokaryotes in a Lithifying Hypersaline Microbial Mat
    Spring, Stefan
    Brinkmann, Nicole
    Murrja, Matilda
    Sproeer, Cathrin
    Reitner, Joachim
    Klenk, Hans-Peter
    GEOMICROBIOLOGY JOURNAL, 2015, 32 (3-4) : 332 - 346
  • [7] Microbial diversity along a transect of agronomic zones
    Ibekwe, AM
    Kennedy, AC
    Frohne, PS
    Papiernik, SK
    Yang, CH
    Crowley, DE
    FEMS MICROBIOLOGY ECOLOGY, 2002, 39 (03) : 183 - 191
  • [8] Small-scale heterogeneity of aluminum and heavy metals in aggregates along a climatic transect
    Wilcke, W
    Amelung, W
    SOIL SCIENCE SOCIETY OF AMERICA JOURNAL, 1996, 60 (05) : 1490 - 1495
  • [9] Fungal molecular diversity of a Puerto Rican subtropical hypersaline microbial mat
    Cantrell, Sharon A.
    Baez-Felix, Claribel
    FUNGAL ECOLOGY, 2010, 3 (04) : 402 - 405
  • [10] Methanogenic and Sulfate-Reducing Activities in a Hypersaline Microbial Mat and Associated Microbial Diversity
    Santiago Cadena
    José Q. García-Maldonado
    Nguyen E. López-Lozano
    Francisco J. Cervantes
    Microbial Ecology, 2018, 75 : 930 - 940