Sequence Analysis of the Complete Mitochondrial Genome of a Medicinal Plant, Vitex rotundifolia Linnaeus f. (Lamiales: Lamiaceae)

被引:12
|
作者
Yu, Xiaoli [1 ]
Duan, Zhonggang [1 ]
Wang, Yanjun [1 ]
Zhang, Qingxin [1 ]
Li, Wei [2 ]
机构
[1] Huizhou Univ, Sch Life Sci, Huizhou 516007, Peoples R China
[2] Qingdao Agr Univ, Coll Landscape Architecture & Forestry, Qingdao 266109, Peoples R China
关键词
Vitex rotundifolia; Lamiales; mitochondrial genome; MTPT; phylogenetic analysis; PHYLOGENETIC ANALYSIS; ALIGNMENT; PROGRAM; FRUITS; GENES; MODEL; SUITE;
D O I
10.3390/genes13050839
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
In the present study, we depicted the complete mitochondrial genome of a valuable medicinal plant, Vitex rotundifolia. The mitochondrial genome of V. rotundifolia, mapped as a circular molecule, spanned 380,980 bp in length and had a GC content of 45.54%. The complete genome contained 38 protein-coding genes, 19 transfer RNAs (tRNAs), and 3 ribosomal RNAs (rRNAs). We found that there were only 38.73% (147.54 kb), 36.28% (138.23 kb), and 52.22% (198.96 kb) of the homologous sequences in the mitochondrial genome of V. rotundifolia, as compared with the mitochondrial genomes of Scutellaria tsinyunensis, Boea hygrometrica, and Erythranthe lutea, respectively. A multipartite structure mediated by the homologous recombinations of the three direct repeats was found in the V. rotundifolia mitochondrial genome. The phylogenetic tree was built based on 10 species of Lamiales, using the maximum likelihood method. Moreover, this phylogenetic analysis is the first to present the evolutionary relationship of V. rotundifolia with the other species in Lamiales, based on the complete mitochondrial genome.
引用
收藏
页数:13
相关论文
共 50 条
  • [1] Plant regeneration from callus cultures of Vitex trifolia (Lamiales: Lamiaceae): a potential medicinal plant
    Samantaray, Sanghamitra
    Bishoyi, Ashok Kumar
    Maiti, Satyabrata
    [J]. REVISTA DE BIOLOGIA TROPICAL, 2013, 61 (03) : 1083 - 1094
  • [2] The complete chloroplast genome sequence of the medicinal plant, Dracocephalum rupestre (Lamiaceae)
    Han, Eun-Kyeong
    Heo, Tae-Im
    Amarsanaa, Gantsetseg
    Park, Jong-Won
    Lee, Jung-Hyun
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2023, 8 (02): : 229 - 232
  • [3] The complete chloroplast genome of Callicarpa bodinieri (Lamiales, Lamiaceae), an ornamental and medicinal plant from Chongqing, China
    Wang, Chao-Ying
    Luo, Ji-Hong
    He, Hui-Liu
    Wang, Qian
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (03): : 1229 - 1230
  • [4] The complete chloroplast genome sequence of the medicinal plant Colquhounia coccinea var. mollis (Lamiaceae)
    Chen, Qi
    Zhang, Dequan
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 3055 - 3056
  • [5] Complete mitochondrial genome sequence and phylogenetic analysis of Myoxocephalus scorpius (Linnaeus, 1758)
    Li, Yuan
    Song, Puqing
    Feng, Ji
    Zhang, Nan
    Zhang, Ran
    Lin, Longshan
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01): : 862 - 863
  • [6] Complete chloroplast genome sequence of Bletilla striata (Thunb.) Reichb. f., a Chinese folk medicinal plant
    Cai, Ziping
    Wang, Hongxia
    Wang, Guoxiang
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03): : 2239 - 2240
  • [7] The complete chloroplast genome and phylogenetic analysis of Acalypha hispida Burm. f. (Euphorbiaceae), an ornamental and medicinal plant
    Dong, Yan
    Du, Changmei
    Yue, Jianhua
    Li, Wenyang
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2023, 8 (11): : 1285 - 1289
  • [8] The complete chloroplast genome of Ocimum gratissimum from India - a medicinal plant in the Lamiaceae
    Balaji, Raju
    Ravichandiran, Kumar
    Tanuja
    Parani, Madasamy
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (03): : 948 - 950
  • [9] Characterization of the complete plastid genome of Chinese medicinal plant Isodon serra (Lamiaceae)
    Zhang, Hui-Ye
    Ma, Wen-Zhe
    Yan, Hai-Fei
    Wang, De-Qin
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03): : 2111 - 2112
  • [10] Sequence and phylogenetic analysis of complete plastid genome of a medicinal plant Heracleum moellendorffii
    Kang, Lu
    Yu, Yan
    Zhou, Song-Dong
    He, Xing-Jin
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01): : 1251 - 1252