Collaborative Sense-Making in Genomic Research: The Role of Visualisation

被引:2
|
作者
Rittenbruch, Markus [1 ]
Vella, Kellie [1 ]
Brereton, Margot [1 ]
Hogan, James M. [1 ]
Johnson, Daniel [1 ]
Heinrich, Julian [2 ]
O'Donoghue, Sean [3 ]
机构
[1] Queensland Univ Technol, Brisbane, Qld 4000, Australia
[2] Bayer Crop Sci, D-400607 Leverkusen, Germany
[3] Garvan Inst Med Res, Sydney, NSW 2000, Australia
基金
澳大利亚研究理事会;
关键词
Collaboration; Bioinformatics; Data visualization; Genomics; Visual analytics; Tools; Browsers; Computer-supported cooperative work; human-centered computing; human-computer interaction; scientific visualisation; PERFORMANCE; CHALLENGES; GENERATION; INSIGHT;
D O I
10.1109/TVCG.2021.3090746
中图分类号
TP31 [计算机软件];
学科分类号
081202 ; 0835 ;
摘要
Genomic research emerges from collaborative work within and across different scientific disciplines. A diverse range of visualisation techniques has been employed to aid this research, yet relatively little is known as to how these techniques facilitate collaboration. We conducted a case study of collaborative research within a biomedical institute to learn more about the role visualisation plays in genomic mapping. Interviews were conducted with molecular biologists (N = 5) and bioinformaticians (N = 6). We found that genomic research comprises a variety of distinct disciplines engaged in complex analytic tasks that each resist simplification, and their complexity influences how visualisations were used. Visualisation use was impacted by group-specific interactions and temporal work patterns. Visualisations were also crucial to the scientific workflow, used for both question formation and confirmation of hypotheses, and acted as an anchor for the communication of ideas and discussion. In the latter case, two approaches were taken: providing collaborators with either interactive or static imagery representing a viewpoint. The use of generic software for simplified visualisations, and quick production and curation was also noted. We discuss these findings with reference to group-specific interactions and present recommendations for improving collaborative practices through visual analytics.
引用
收藏
页码:4477 / 4489
页数:13
相关论文
共 50 条
  • [1] Collaborative sense-making in print and digital text environments
    Dennis S. Davis
    Carin Neitzel
    [J]. Reading and Writing, 2012, 25 : 831 - 856
  • [2] Collaborative sense-making in print and digital text environments
    Davis, Dennis S.
    Neitzel, Carin
    [J]. READING AND WRITING, 2012, 25 (04) : 831 - 856
  • [3] Visualizing argumentation: software tools for collaborative and educational sense-making
    Hartley, JR
    [J]. JOURNAL OF COMPUTER ASSISTED LEARNING, 2004, 20 (02) : 160 - 160
  • [4] Collaborative sense-making during simulated Intelligence Analysis Exercises
    Baber, Chris
    Attfield, Simon
    Conway, Gareth
    Rooney, Chris
    Kodagoda, Neesha
    [J]. INTERNATIONAL JOURNAL OF HUMAN-COMPUTER STUDIES, 2016, 86 : 94 - 108
  • [5] Repurposing requirements: Improving collaborative sense-making over the lifecycle
    Selvin, AM
    Shum, SJB
    [J]. INTERNATIONAL CONFERENCE ON PRODUCT FOCUSED SOFTWARE PROCESS IMPROVEMENT, 1999, 195 : 539 - 559
  • [6] Making sense of school leaders' sense-making
    Ganon-Shilon, Sherry
    Schechter, Chen
    [J]. EDUCATIONAL MANAGEMENT ADMINISTRATION & LEADERSHIP, 2017, 45 (04) : 682 - 698
  • [7] Making sense of identities as sense-making devices
    Sfard, Anna
    [J]. ZDM-MATHEMATICS EDUCATION, 2019, 51 (03): : 555 - 564
  • [8] Making sense of identities as sense-making devices
    Anna Sfard
    [J]. ZDM, 2019, 51 : 555 - 564
  • [9] Documentary as sense-making
    Hight, Craig
    Harindranath, Ramaswami
    [J]. STUDIES IN DOCUMENTARY FILM, 2014, 8 (03) : 177 - 178
  • [10] The ethics of sense-making
    Weichold, Martin
    Candiotto, Laura
    [J]. FRONTIERS IN PSYCHOLOGY, 2023, 14