Design of a folding inhibitor of the HIV-1 protease

被引:2
|
作者
Tiana, G
Broglia, RA
Sutto, L
Provasi, D
机构
[1] Univ Milan, Dipartimento Fis, I-20133 Milan, Italy
[2] Ist Nazl Fis Nucl, I-20133 Milan, Italy
[3] Univ Copenhagen, Niels Bohr Inst, DK-2100 Copenhagen, Denmark
关键词
HIV-1; protease; Monte Carlo simulations; local elementary structures; HIV-PR monomer;
D O I
10.1080/089270500262721
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
A novel way to inhibit HIV-1 protease by destabilizing its native state is discussed. A simplified protein model is used together with Monte Carlo simulations, to assess the destabilizing effect of peptides displaying the same sequence as specific fragments of the protein which are essential for its stability. Model calculations also show that it is unlikely that the protein can escape the inhibitory peptide by point mutations.
引用
收藏
页码:765 / 771
页数:7
相关论文
共 50 条
  • [1] A folding inhibitor of the HIV-1 protease
    Broglia, RA
    Provasi, D
    Vasile, F
    Ottolina, G
    Longhi, R
    Tiana, G
    PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2006, 62 (04) : 928 - 933
  • [2] THE USE OF HIV-1 PROTEASE STRUCTURE IN INHIBITOR DESIGN
    BABINE, RE
    ZHANG, N
    JURGENS, AR
    SCHOW, SR
    DESAI, PR
    JAMES, JC
    SEMMELHACK, MF
    BIOORGANIC & MEDICINAL CHEMISTRY LETTERS, 1992, 2 (06) : 541 - 546
  • [3] HIV-1 protease inhibitor
    Lloyd, AW
    DRUG DISCOVERY TODAY, 1996, 1 (06) : 261 - 261
  • [4] The coupling of inhibitor binding to the folding and structural cooperativity of the HIV-1 protease.
    Todd, MJ
    Freire, E
    BIOPHYSICAL JOURNAL, 1999, 76 (01) : A143 - A143
  • [5] The evolution of the HIV-1 protease folding stability
    Ferreiro, David
    Khalil, Ruqaiya
    Gallego, Maria J.
    Osorio, Nuno S.
    Arenas, Miguel
    VIRUS EVOLUTION, 2022, 8 (02)
  • [6] DESIGN, SYNTHESIS AND CHARACTERIZATION OF AN IRREVERSIBLE INHIBITOR OF HIV-1 PROTEASE
    KALDOR, SW
    SCHEVITZ, RW
    WERY, JP
    CLAWSON, DK
    BURCK, PJ
    BERG, DH
    KAISER, RE
    LAI, MT
    MUNROE, JE
    JONES, ND
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 1992, 203 : 178 - MEDI
  • [7] HIV-1 protease folding and the design of drugs which do not create resistance
    Broglia, R. A.
    Levy, Y.
    Tiana, G.
    CURRENT OPINION IN STRUCTURAL BIOLOGY, 2008, 18 (01) : 60 - 66
  • [8] Computational design of novel cyclic urea as HIV-1 protease inhibitor
    Vijjulatha, Manga
    Kanth, S. Sree
    CENTRAL EUROPEAN JOURNAL OF CHEMISTRY, 2007, 5 (04): : 1064 - 1072
  • [9] Atomistic simulations of the HIV-1 protease folding inhibition
    Verkhivker, Gennady
    Tiana, Guido
    Camilloni, Carlo
    Provasi, Davide
    Broglia, Ricardo A.
    BIOPHYSICAL JOURNAL, 2008, 95 (02) : 550 - 562
  • [10] Folding regulates autoprocessing of HIV-1 protease precursor
    Chatterjee, A
    Mridula, P
    Mishra, RK
    Mittal, R
    Hosur, RV
    JOURNAL OF BIOLOGICAL CHEMISTRY, 2005, 280 (12) : 11369 - 11378