Structure of undecaprenyl pyrophosphate synthase from Acinetobacter baumannii

被引:6
|
作者
Ko, Tzu-Ping [1 ]
Huang, Chi-Hung [2 ]
Lai, Shu-Jung [1 ]
Chen, Yeh [2 ]
机构
[1] Acad Sinica, Inst Biol Chem, Taipei, Taiwan
[2] HungKuang Univ, Dept Biotechnol, Taichung, Taiwan
关键词
undecaprenyl pyrophosphate synthase; Acinetobacter baumannii; peptidoglycan; CIS-PRENYLTRANSFERASE; CRYSTAL-STRUCTURE; MECHANISM; CONDENSATION; MAGNESIUM; RESIDUES; COMPLEX;
D O I
10.1107/S2053230X18012931
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Undecaprenyl pyrophosphate (UPP) is an important carrier of the oligosaccharide component in peptidoglycan synthesis. Inhibition of UPP synthase (UPPS) may be an effective strategy in combating the pathogen Acinetobacter baumannii, which has evolved to be multidrug-resistant. Here, A. baumannii UPPS (AbUPPS) was cloned, expressed, purified and crystallized, and its structure was determined by X-ray diffraction. Each chain of the dimeric protein folds into a central beta-sheet with several surrounding alpha-helices, including one at the C-terminus. In the active site, two molecules of citrate interact with the side chains of the catalytic aspartate and serine. These observations may provide a structural basis for inhibitor design against AbUPPS.
引用
收藏
页码:765 / 769
页数:5
相关论文
共 50 条
  • [1] Cocktailed fragment screening by X-ray crystallography of the antibacterial target undecaprenyl pyrophosphate synthase from Acinetobacter baumannii
    Thorpe, James H.
    Wall, Ian D.
    Sinnamon, Robert H.
    Taylor, Amy N.
    Stavenger, Robert A.
    ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2020, 76 : 40 - 46
  • [2] Structure of ATP synthase from ESKAPE pathogen Acinetobacter baumannii
    Demmer, Julius K.
    Phillips, Ben P.
    Uhrig, O. Lisa
    Filloux, Alain
    Allsopp, Luke P.
    Bublitz, Maike
    Meier, Thomas
    SCIENCE ADVANCES, 2022, 8 (07):
  • [3] The discovery of potent and selective inhibitors of undecaprenyl pyrophosphate synthase
    Hurley, Brian
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2009, 237
  • [4] Crystal structures and catalytic mechanism of undecaprenyl pyrophosphate synthase
    不详
    EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS, 2005, 34 (06): : 662 - 662
  • [5] Substrate specificity of undecaprenyl pyrophosphate synthase as potential antibacterial target
    Martinez, Christina
    Dodbele, Samantha
    Troutman, Jerry
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2014, 247
  • [6] Isolation and characterization of an autoinducer synthase from Acinetobacter baumannii
    Niu, Chen
    Clemmer, Katy M.
    Bonomo, Robert A.
    Rather, Philip N.
    JOURNAL OF BACTERIOLOGY, 2008, 190 (09) : 3386 - 3392
  • [7] Inhibition of bacterial undecaprenyl pyrophosphate synthase by small fungal molecules
    Inokoshi, Junji
    Nakamura, Yuichiro
    Komada, Saori
    Komatsu, Katsuichiro
    Umeyama, Hideaki
    Tomoda, Hiroshi
    JOURNAL OF ANTIBIOTICS, 2016, 69 (11): : 798 - 805
  • [8] The effect of triton concentration on the activity of undecaprenyl pyrophosphate synthase inhibitors
    Li, H
    Huang, JZ
    Jiang, XH
    Seefeld, M
    McQueney, M
    Macarron, R
    JOURNAL OF BIOMOLECULAR SCREENING, 2003, 8 (06) : 712 - 715
  • [9] Inhibition of bacterial undecaprenyl pyrophosphate synthase by small fungal molecules
    Junji Inokoshi
    Yuichiro Nakamura
    Saori Komada
    Katsuichiro Komatsu
    Hideaki Umeyama
    Hiroshi Tomoda
    The Journal of Antibiotics, 2016, 69 : 798 - 805
  • [10] Catalytic mechanism revealed by the crystal structure of undecaprenyl pyrophosphate synthase in complex with sulfate, magnesium, and triton
    Chang, SY
    Ko, TP
    Liang, PH
    Wang, AHJ
    JOURNAL OF BIOLOGICAL CHEMISTRY, 2003, 278 (31) : 29298 - 29307