A Brief Analysis of Proteomic Profile Changes during Zebrafish Regeneration

被引:1
|
作者
Ulhaq, Zulvikar Syambani [1 ,2 ]
Tse, William Ka Fai [3 ]
机构
[1] Maulana Malik Ibrahim State Islamic Univ Malang, Fac Med & Hlth Sci, Dept Biochem, Batu 65144, Indonesia
[2] Natl Res & Innovat Agcy, Cent Jakarta 10340, Indonesia
[3] Kyushu Univ, Lab Dev Disorders & Toxicol, Ctr Promot Int Educ & Res, Fac Agr, Fukuoka 8190395, Japan
关键词
proteomic; regeneration; caudal fin; heart; reparative neurogenesis; zebrafish; HEART REGENERATION; CAUDAL FIN; LIVER-REGENERATION; INFLAMMATION; PROTEINS; DYNAMICS; PROMOTES; PATHWAY; GROWTH; PHASE;
D O I
10.3390/biom12010035
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Unlike mammals, zebrafish are capable to regenerate many of their organs, however, the response of tissue damage varies across tissues. Understanding the molecular mechanism behind the robust regenerative capacity in a model organism may help to identify and develop novel treatment strategies for mammals (including humans). Hence, we systematically analyzed the current literature on the proteome profile collected from different regenerated zebrafish tissues. Our analyses underlining that several proteins and protein families responsible as a component of cytoskeleton and structure, protein synthesis and degradation, cell cycle control, and energy metabolism were frequently identified. Moreover, target proteins responsible for the initiation of the regeneration process, such as inflammation and immune response were less frequently detected. This highlights the limitation of previous proteomic analysis and suggested a more sensitive modern proteomics analysis is needed to unfold the mechanism. This brief report provides a list of target proteins with predicted functions that could be useful for further biological studies.
引用
收藏
页数:10
相关论文
共 50 条
  • [1] Proteomic Analysis of Zebrafish Caudal Fin Regeneration
    Saxena, Sandeep
    Singh, Sachin K.
    Lakshmi, Mula G. Meena
    Meghah, Vuppalapaty
    Bhatti, Bhawna
    Swamy, Cherukuvada V. Brahmendra
    Sundaram, Curam S.
    Idris, Mohammed M.
    MOLECULAR & CELLULAR PROTEOMICS, 2012, 11 (06)
  • [2] Proteomic analysis of changes during the onset of amphibian limb regeneration
    Mescher, Anthony Louis
    Neff, Anton
    King, Michael
    FASEB JOURNAL, 2008, 22
  • [3] Comparison of proteomic profiles in the zebrafish retina during experimental degeneration and regeneration
    Karen Eastlake
    Wendy E. Heywood
    Dhani Tracey-White
    Erika Aquino
    Emily Bliss
    Gerardo R. Vasta
    Kevin Mills
    Peng T. Khaw
    Mariya Moosajee
    G. Astrid Limb
    Scientific Reports, 7
  • [4] Comparison of proteomic profiles in the zebrafish retina during experimental degeneration and regeneration
    Eastlake, Karen
    Heywood, Wendy E.
    Tracey-White, Dhani
    Aquino, Erika
    Bliss, Emily
    Vasta, Gerardo R.
    Mills, Kevin
    Khaw, Peng T.
    Moosajee, Mariya
    Limb, G. Astrid
    SCIENTIFIC REPORTS, 2017, 7
  • [5] Changes in Translational Efficacy During Zebrafish Heart Regeneration
    Goldman, Joseph A.
    Bazzini, Ariel
    Giraldez, Antonio
    Poss, Kenneth
    CIRCULATION RESEARCH, 2019, 125
  • [6] A comparative proteomic analysis during urodele lens regeneration
    Roddy, Meagan
    Fox, Timothy P.
    McFadden, Jonathan P.
    Nakamura, Kentra
    Del Rio-Tsonis, Katia
    Tsonis, Panagiotis A.
    BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2008, 377 (01) : 275 - 279
  • [7] Transcriptome Analysis of Zebrafish Microglia During Retinal Regeneration
    Mitchell, Diana
    Sun, Chi
    Stenkamp, Deborah L.
    INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE, 2018, 59 (09)
  • [8] Quantitative proteomic reveals the dynamic of protein profile during final oocyte maturation in zebrafish
    Ge, Chunmei
    Lu, Weiqun
    Chen, Aqin
    BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2017, 490 (03) : 657 - 663
  • [9] Quantification of proteomic profile changes in the hemolymph of crayfish during in vitro coagulation
    Mengal, Kifayatullah
    Kor, Golara
    Siino, Valentina
    Buric, Milos
    Kozak, Pavel
    Levander, Fredrik
    Niksirat, Hamid
    DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY, 2023, 147
  • [10] Dynamic changes in microglial and macrophage characteristics during degeneration and regeneration of the zebrafish retina
    Mitchell, Diana M.
    Lovel, Anna G.
    Stenkamp, Deborah L.
    JOURNAL OF NEUROINFLAMMATION, 2018, 15