Investigation of reactive properties, adsorption on fullerene, DFT, molecular dynamics simulation of an anthracene derivative targeting dihydrofolate reductase and human dUTPase

被引:10
|
作者
Mary, Y. Sheena [1 ]
Mary, Y. Shyma [1 ]
Armakovic, Stevan [2 ]
Armakovic, Sanja J. [3 ]
Yadav, Rohitash [4 ]
Celik, Ismail [5 ]
Razavi, Razieh [6 ]
机构
[1] Thushara, Neethinagar 64, Kollam, Kerala, India
[2] Univ Novi Sad, Fac Sci, Dept Phys, Novi Sad, Serbia
[3] Univ Novi Sad, Fac Sci, Dept Chem Biochem & Environm Protect, Novi Sad, Serbia
[4] All India Inst Med Sci, Dept Pharmacol, Rishikesh, India
[5] Erciyes Univ, Fac Pharm, Dept Pharmaceut Chem, Kayseri, Turkey
[6] Univ Jiroft, Fac Sci, Dept Chem, Jiroft, Iran
来源
关键词
DFT; adsorption; fullerene; MD simulations; local reactivity; VIBRATIONAL-SPECTRA; TOPOISOMERASE-II; FORCE-FIELD; HOMO-LUMO; CONFORMATIONAL-ANALYSIS; FT-RAMAN; MITOXANTRONE; DNA; DOCKING; NBO;
D O I
10.1080/07391102.2021.1953602
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Anthracenes are aromatic compounds with flexible structure and reactivity which are of great interest to theoretical and experimental chemists. Theoretical investigations of 1,4-dihydroxy-5,8-bis[2-(2hydroxyethylamino)ethylamino]anthracene-9,10-dione (Mitoxantrone) (DDEA) based on density functional theory, molecular dynamics and adsorption on fullerene are reported in the present research. The suitable situation for adsorption with fullerene (C60) is the cyclohex-2-ene-1,4-dione ring of DDEA. Selected quantum-molecular descriptors have been calculated to predict the most reactive sites of the DDEA molecule. Interactions of DDEA with water have been studied using MD simulations. MD simulations were also used to study solubility parameter, a significant quantity for the development of pharmaceutical formulations. The affinity of DDEA on human dihydrofolate reductase and deoxyuridine triphosphatase enzymes was investigated by MD simulation of the protein-ligand complex obtained by molecular docking study.
引用
收藏
页码:10952 / 10961
页数:10
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