ImagePy: an open-source, Python']Python-based and platform-independent software package for bioimage analysis

被引：30
|
作者：
Wang, Anliang [1 ]
Yan, Xiaolong [1 ]
Wei, Zhijun [2 ]
机构：
[1] Natl Marine Environm Forecasting Ctr, Div Marine Disaster Forecasting & Warning, Beijing 100081, Peoples R China
[2] Dalian Univ Technol, State Key Lab Coastal & Offshore Engn, Dalian 116024, Peoples R China
来源：
BIOINFORMATICS | 2018年 / 34卷 / 18期
基金：
中国国家自然科学基金;
关键词：
D O I：
10.1093/bioinformatics/bty313
中图分类号：
Q5 [生物化学];
学科分类号：
071010 ; 081704 ;
摘要：
aSummary: This note presents the design of a scalable software package named ImagePy for analysing biological images. Our contribution is concentrated on facilitating extensibility and interoperability of the software through decoupling the data model from the user interface. Especially with assistance from the Python ecosystem, this software framework makes modern computer algorithms easier to be applied in bioimage analysis. Availability and implementation: ImagePy is free and open source software, with documentation and code available at https://github.com/Image-Py/imagepy under the BSD license. It has been tested on the Windows, Mac and Linux operating systems. Contact: yxdragon@imagepy.org or wzjdlut@dlut.edu.cn
引用
收藏
页码：3238 / 3240
页数：3
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