Nucleotide sequences of two Korean isolates of cucumber green mottle mosaic virus

被引：0
|
作者：
Kim, SM
Lee, JM
Yim, KO
Oh, MH
Park, JW
Kim, KH [1 ]
机构：
[1] Seoul Natl Univ, Sch Agr Biotechnol, Seoul 151742, South Korea
[2] Seoul Natl Univ, Ctr Plant Mol Genet & Breeding Res, Seoul 151742, South Korea
[3] Kyung Hee Univ, Dept Hort, Yongin 449701, South Korea
[4] Natl Plant Quarantine Serv, Anyang 430016, South Korea
[5] TS Corp, Inchon 400201, South Korea
[6] Rural Dev Adm, Agr Sci & Technol Inst, Suwon 441707, South Korea
来源：
MOLECULES AND CELLS | 2003年 / 16卷 / 03期
关键词：
CGMMV-KOM; CGMMV-KW; genome; sequence; phylogeny;
D O I：
暂无
中图分类号：
Q5 [生物化学]; Q7 [分子生物学];
学科分类号：
071010 ; 081704 ;
摘要：
The nucleotide sequences of the genomic RNAs of Cucumber green mottle mosaic virus Korean watermelon isolate (CGMMV-KW) and Korean oriental melon isolate (CGMMV-KOM) were determined and compared to the sequences of other tobamoviruses including CGMMV strains W and SH. Each CGMMV isolate had a genome of 6,424 nucleotides. Each also had 60 and 176 nucleotides of 5' and 3' untranslated regions (UTRs),. respectively, and four open reading frames (ORF1-4). ORFs 1 to 4 encode proteins of 129, 186, 29, and 17.4 kDa, respectively. The nucleotide and deduced amino acid sequences of CGMMV-KOM and CGMMV-KW were more than 98.3% identical. When compared to other CGMMV strains in a phylogenetic analysis they were found to form a distinct virus clade, and were more distantly related to other tobamoviruses (23.5-56.7% identity).
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页码：407 / 412
页数：6
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